| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1190 |
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| Symbol | |
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| ID | 5057640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1336766 |
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| End bp | 1339189 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640473459 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001158038 |
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| Protein GI | 145593741 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4724] Endo-beta-N-acetylglucosaminidase D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.112997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.725074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGCC TGCTCCTGTC CCTGCTGGCC GGTGCCACAG TCGTGGCCGG CAGCACCCTC
ACCGCGGCTC CCACCGTGGC GGCCGCCACC GAAGCGGTCG ACGGCAGCCA GCCGTACGCC
TCGTACTGGT TCCCGGACGA ACTCCTCGAC TGGGATCCGG AGGCGGATCC CGACGCCCGC
TTCAACCGGT CCATGGTTCC GCTCCAGCCC CGGGCCACCG ATCCCGCGCT GAAGGCCAAC
CCGAACGCGC GAGCGGGCGA GGGTCGAGTG GCGTCGCTGG TGTCGTTCGC ACCGACGTCC
GACAACCCGT CGCAGGGCTC ACTCGACGAG GACTACTACG CCTTTGGCCA CTGGCAGTAC
ATCGACACCC TGGTGTTCTG GGGCGGATCG GCCGTCGAGG GCCTGATTCT CGCGCCGAAC
CCGACCGTCA TCGACGCCGC GCACCGCAAC GGCGTCAAGG TGTACGGCAC GGTCTTCTTC
CCGCCGGTCG CCTACGGCGG CAAGCTCGAA TGGGTGCACG ACTTCGTGCG TAAGTCGGGC
TCGACCTATC CGGTCGCCGA CAAGCTCGCG GAGGTTGCCC AGTACTACGG CTTCGAAGGG
TGGTTCATCA ACCAGGAGAC GACGGGCGGC GACGCCGCCC TCGCCACCGA ACTCCGCAAC
CTGATGACCT ACGGCCGGAA CAAGGGCGTG GAGTTCATGT GGTATGACGC CATGACCGAA
TCCGGCGCCA TCTCTTGGCA GAACGCGCTC ACCACCGCCA ACGACTCGTT CCTGGGCGGC
CCGACGCCGG TGTCGGACTC GATGTTTCTC AACTTCTGGT GGTCCACCGG CGGCCTGGCC
TCGTCCCGGG ACCGCGCCGA GTCGCTCGGG CGGAGCGGGT ACGACCTGTA CTCCGGCATC
GACACCGAGG CCAACGGCTA CCAGACCAAC GTCAACTGGG ACGCACTGTT CCCCGCCGGT
GAGTCGCACG TGACCTCCCT GGGCATCTAC CGCCCGGAGT GGACCTGGAC GTCGTCGAGC
GGGCCGGCCG ACTTCCGGGC CCGCGACTCC CGCTACTGGG TCGGCGCGAA CGGCGATCCG
TCGAACACCA CGACCTCCTC GCCCTGGAAA GGGCTCGCCA CCTACGTCGC CGAGTCCACG
CCGGTGACCC AGAAGCCGTT TGTGACCAGC TTCAACGCCG GGCAGGGTTC GGCATACCAC
GTCGCCGGGA AGCAGGTGCG CACCGGCGGC TGGAACAACC TGTCGATGCA GGACGTGCCG
CCGACCTACC AGTGGGTGGT CTCCTCGACC GGCACGAAGC TGACGCCGTC GCTCGACTTC
ACCGATGCCT ACGAGGGCGG CTCGACGCTG CGGCTCAACG GCAGGCTGGA CGCGGCGAAC
ACCGTGCGCC TCTACCAGAC CGACCTGCCG GTCGCCGCGG ACACCAAGCT GTCGACGGTC
GTCAAGACCC CGGCCGCCGG TGCGACCCAC CTGAGCGTGG CGGTGGCCTT CACCGACGCC
CCGAACACCT TCACCACTCT CGACCTCGGG TCGACCTCCG GCACCGGTTG GGAGCGTCGC
GTTCTCGACC TGTCGGCGTA CGCCGGTAAG ACCATCGCCC AGATCGGGCT GCGGGCGTCG
GCGTCGGCCG TCGTCCCGTC CTACGACATC AAGGTTGGCC AGCTCGCCGT GTACGACGGG
GCCGTGGACA CCGCTGCCGC ACCGACTGGT CTGACCGTCC TGGGCAGCAC CGACGTCTCG
GCGACCCGCA AGACGCTGAG GTTGGGCTGG ACCCCGTCGG CCAGCGGATC GGTGCACCAC
TACGACGTGT TCCGCCGCAA CCCGGACGGT AGCCGTACCC ACCTGGGCGC CACGCCGAAC
GACGTGTACT TCGTGCCGCA GCTCGACCGG GTCGGCGCCG AGACCAGCGC GGTCATCGAG
GTCGAGGCGG TGTCGACCGA GTACGGCCGC TCCACCGCGG CGACCACGAC CGTCACCTGG
TCCGGCACGC CGCCGACCAC GACCAACCTG GCGCTCGACC GGCCGGCGAC GGCGTCCGGG
CAGTGCACCG CCGCCGAAGG ACCCGCCAAA GCCGTCAACG GCAGTGTCTC CGGCGGGAAC
AGCGACAAGT GGTGCACGAC GACCGCCGAC CAGTGGCTCG AGGTTGATCT GGGCTCGGTC
CGTTCCCTCG ACCGGTTCGT CGTCGCACAC GCCGCCGCGG GCGGCGAGTC CGCCTCGTGG
AACACCCGCG ACTTCACCAT CGAAGTACGC TCCGCGGCCT CGGACCCGTG GACCACGGCC
GTCACCGTCA CCGACAACAC CGCCGAGCTG ACAACACACT CAGTGAACGT CAGCGCACGG
TACGTGCGGC TGGTTGTCGA CACCCCGACC CAGGACGGCG ACCCCGCCAC CCGCATATAC
GAGTTCGAGG CCTGGGGCGA GTAG
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| Protein sequence | MRRLLLSLLA GATVVAGSTL TAAPTVAAAT EAVDGSQPYA SYWFPDELLD WDPEADPDAR
FNRSMVPLQP RATDPALKAN PNARAGEGRV ASLVSFAPTS DNPSQGSLDE DYYAFGHWQY
IDTLVFWGGS AVEGLILAPN PTVIDAAHRN GVKVYGTVFF PPVAYGGKLE WVHDFVRKSG
STYPVADKLA EVAQYYGFEG WFINQETTGG DAALATELRN LMTYGRNKGV EFMWYDAMTE
SGAISWQNAL TTANDSFLGG PTPVSDSMFL NFWWSTGGLA SSRDRAESLG RSGYDLYSGI
DTEANGYQTN VNWDALFPAG ESHVTSLGIY RPEWTWTSSS GPADFRARDS RYWVGANGDP
SNTTTSSPWK GLATYVAEST PVTQKPFVTS FNAGQGSAYH VAGKQVRTGG WNNLSMQDVP
PTYQWVVSST GTKLTPSLDF TDAYEGGSTL RLNGRLDAAN TVRLYQTDLP VAADTKLSTV
VKTPAAGATH LSVAVAFTDA PNTFTTLDLG STSGTGWERR VLDLSAYAGK TIAQIGLRAS
ASAVVPSYDI KVGQLAVYDG AVDTAAAPTG LTVLGSTDVS ATRKTLRLGW TPSASGSVHH
YDVFRRNPDG SRTHLGATPN DVYFVPQLDR VGAETSAVIE VEAVSTEYGR STAATTTVTW
SGTPPTTTNL ALDRPATASG QCTAAEGPAK AVNGSVSGGN SDKWCTTTAD QWLEVDLGSV
RSLDRFVVAH AAAGGESASW NTRDFTIEVR SAASDPWTTA VTVTDNTAEL TTHSVNVSAR
YVRLVVDTPT QDGDPATRIY EFEAWGE
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