| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1176 |
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| Symbol | |
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| ID | 5057626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1319047 |
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| End bp | 1320750 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640473445 |
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| Product | regulator of chromosome condensation, RCC1 |
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| Protein accession | YP_001158024 |
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| Protein GI | 145593727 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
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| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.308067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.550522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGGGT TCTGTCAGCG GCTGGATCGG GGCGCCGGAG TGCGCCGGGC GGGACGCGCT
GTCGTCGGAT GGCTCGCCCT CGCGCTGGCG GTGACGGTAA CGCAGGCGAT CGGTGTGTCG
CCCGCGTTGG CGCAGCACAA GCCCGGATCG ACCGCGGTGT CGGAATTCCT CCTGGCCTGG
GGGAAGAACG ACAATGGGCA GCTTGGTAAC GGAAGCACTA CCGGAAGTAA CGTGCCGATC
GCGGTGAGCC TGCCGCTGGG CACCACGGTT ACCGCTGTCG CCGCCGGTCG CTTTCACAGT
CTGGCGTTGA CCTCGGCCGG CACGGTCCTC GCCTGGGGCA CCAACCACTT TGGTCAGCTC
GGTGACGGAA CCCTGATCGA CCGTAGTGCG CCCGTCGAGG TAAGTCTGCC GCCCGGCACC
ACGGTCACCG CCGTCGCCGC TGGCGGCGTC CACAGCATGG CATTGACCTC GGTCGGCACC
GTCCTGGCCT GGGGTGGCAA CGGCGTCGGT CAGCTCGGGG ACGGAAGCAC GACCAGGCGT
ACCACGCCGG TCGAGGCGAT CCTGCCGTCC GGTGTCACCG TCACCGCTGT CGCCGCCGCC
GAAAGCCACA GCCTGGCGGT GACCTCTGCC GGTGCCGCCC TCGCCTGGGG GCTGAACGGC
ACTGGTCAAC TCGGGGACGG GAGCACCATC AACCGGAGTA CGCCGGTGTC TGTCGCCCTG
CCCCTCGGCA CCGAGGTCAC TGCCATCGCT GCCGGCCGCC TCCACAGCCT GGCGGTCACG
TCCGTCGGTG CCGCCCTCGC CTGGGGGTAC AACGGCACTG GTCAACTCGG GGACGGGACC
ACCATCAACC GGAGTACGCC GGTGTCTGTC GCCCTGCCCC TCGGGGCCGA GGTCACCGCC
GTCGTGGCCG GCCGCCTCCA CAGTGCTGCG TTGACCACGG CCGGCACCGC CCTCGCCTGG
GGCGACAACG GCTTCGGGCA GCTCGGAAAC GGGGGTGGCA GCAACAGCAG CGAAGCCGTC
GAGGTCAGCC TGCCCACGGG CACCACGCTC GCGGCCATCG CGTCCCGCGA CAGCGACCAC
ACCATCGCGA TAGCCGGCGA CGGCACCGCC CTCGCCTGGG GGAGCAATAT CTTTGGCCAA
CTCGGTGATG GAACCACCAC CAACCCCAGC ACGCCGGTGC CCGTAGCCCT GCCTACGGGC
ATCACGCTCC TCACCACGGC TGCCGGCAGC GACCACACGC TGGCCCTGCC TGCCCAGCAA
TCCCGCTCCA CCACGAGTGT GCAGGTCTCG CCGCAGGACC CGACCGTGGA TCAGGACGTC
ACGCTCACCG CCACCGTCAC CTGCGACCTC GGAAGCCCGA CCGGCATCGT CACCTTCCGC
AACAACAACA CCGACCTCGC CACCGTGCCC CTGGACACCA CCAACACCGC CACCCACACC
ACGACGCTCC CGGTCGGCAC CAACACCCTG ACCGCCGACT TCACCAGCAC CAACACCGTC
TGCCCCAACA GTCAGTCCGA GGCCACCACC ATCACCGTCG CCGATCCCAC CGACCCGACC
GACCCCACCG ATCCCGACCT ACCCATCACC GGGGTCAGCC TGCCCAGCCT GCTCGGCACC
GCCACCCTGC TCATCCTCAT CGGCGCCAGC TTCATCGTCC TCACCCGCCG ACACCGATCG
ACCCACACTG AGGTGGCCGG GTAG
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| Protein sequence | MQGFCQRLDR GAGVRRAGRA VVGWLALALA VTVTQAIGVS PALAQHKPGS TAVSEFLLAW
GKNDNGQLGN GSTTGSNVPI AVSLPLGTTV TAVAAGRFHS LALTSAGTVL AWGTNHFGQL
GDGTLIDRSA PVEVSLPPGT TVTAVAAGGV HSMALTSVGT VLAWGGNGVG QLGDGSTTRR
TTPVEAILPS GVTVTAVAAA ESHSLAVTSA GAALAWGLNG TGQLGDGSTI NRSTPVSVAL
PLGTEVTAIA AGRLHSLAVT SVGAALAWGY NGTGQLGDGT TINRSTPVSV ALPLGAEVTA
VVAGRLHSAA LTTAGTALAW GDNGFGQLGN GGGSNSSEAV EVSLPTGTTL AAIASRDSDH
TIAIAGDGTA LAWGSNIFGQ LGDGTTTNPS TPVPVALPTG ITLLTTAAGS DHTLALPAQQ
SRSTTSVQVS PQDPTVDQDV TLTATVTCDL GSPTGIVTFR NNNTDLATVP LDTTNTATHT
TTLPVGTNTL TADFTSTNTV CPNSQSEATT ITVADPTDPT DPTDPDLPIT GVSLPSLLGT
ATLLILIGAS FIVLTRRHRS THTEVAG
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