Gene Strop_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1072 
Symbol 
ID5057519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1218275 
End bp1219264 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID640473339 
Productaldo/keto reductase 
Protein accessionYP_001157921 
Protein GI145593624 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.382746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.402703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTACG AGGCCGCCGA CACACGCTAC GACCAGATGA CCTACCGGCG CAGCGGGACC 
AGTGGGCTCC GCCTGCCGGC GATCTCGCTC GGCCTGTGGC ACAACTTCGG GCCGGACCGC
CCCTTCGATC GACAGCGGGA CATCGTCCGC CGGGCCTTCG ACCTCGGCGT CACCCACTTC
GACCTCGCCA ACAACTATGG CCCACCACCG GGCTCAGCCG AGGAGAACTT CGGCCGGATG
CTCGCCACGG ACCTGAAGCC GTACCGCGAT GAACTGGTCA TCTCCAGCAA AGCCGGCTAC
CTGATGTGGC CCGGACCGTA CGGCGAGTGG GGGTCCCGCA AATACCTGGT CGCCTCCCTG
GACCAGTCGC TACGCCGCCT GGGACTGGAC TATGTCGACA TCTTCTACAG CCACCGGTAC
GACCCGGACA CCCCGCTGGA AGAGACGATG GGCGCCCTGG ACGCCGTCGT TCGGGCCGGC
AAGGCGCTCT ACGTCGGCAT CTCCAACCAC ACCTCGGAAC AGACCCGACG GGCCGCGGCG
ATCCTGCGCG ACCTGGGCAC CCCGCTGCTG ATCAACCAGC CGTCGTACTC GATGCTGAAC
CGCTGGACCG AGGAGGACGG GCTGCTCGAC ACGCTCACGG ATGTCGGTGC CGGCTGCATC
TCCTTCAGCC CACTGGCGCA GGGCCTGCTT ACCGACCGCT ACCTCGACGG CATCCCCGCC
GACTCCCGGG TACGCACCAG CGTCCACCTG TCCGAGCGGG ACGTGAGCCC GGAACGGCTG
GCCACCATCC GTGGACTCGC CGCCATCGCC CAACGTCGCG GCCAGTCCCT CGCGCAACTC
GCACTCGCCT GGGCACTGCG CGACCCCCGG ATGACCAGTC TGATCATCGG CGCCAGCAGC
GTCTCCCAAC TCGAGGCCAA CCTCGCCACG CTGGACAGCC CCGACCTGAC CGCCGAGGAG
CTGGCCGAAA TCGACCGCCA GCTCAGCTGA
 
Protein sequence
MTYEAADTRY DQMTYRRSGT SGLRLPAISL GLWHNFGPDR PFDRQRDIVR RAFDLGVTHF 
DLANNYGPPP GSAEENFGRM LATDLKPYRD ELVISSKAGY LMWPGPYGEW GSRKYLVASL
DQSLRRLGLD YVDIFYSHRY DPDTPLEETM GALDAVVRAG KALYVGISNH TSEQTRRAAA
ILRDLGTPLL INQPSYSMLN RWTEEDGLLD TLTDVGAGCI SFSPLAQGLL TDRYLDGIPA
DSRVRTSVHL SERDVSPERL ATIRGLAAIA QRRGQSLAQL ALAWALRDPR MTSLIIGASS
VSQLEANLAT LDSPDLTAEE LAEIDRQLS