Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0929 |
Symbol | |
ID | 5057373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1038377 |
End bp | 1040476 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640473199 |
Product | hypothetical protein |
Protein accession | YP_001157784 |
Protein GI | 145593487 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.991859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.115087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACCGAC TCGCCGGCGC CACCAGCCCG TACCTGATTC AGCACAAGGA CAACCCGGTC GACTGGTGGC CGTGGTGTGC GGAGGCGTTC GCCGAGGCCC ACCGGCGGGA CGTCCCGATC ATGATCTCGG TCGGCTACGC CGCCTGCCAC TGGTGTCACG TCATGGCGCA CGAGTCCTTC GCCGACGAGC AGGTGGCCGC GCTGCTGAAC GAGGGCTTCG TGGCGATCAA AGTGGACCGC GAGGAGCGTC CGGACGTCGA CGCCGTCTAC ATGACGGCGA CCCAGGCCAT GACCGGGCAG GGTGGCTGGC CCATGACCGT CTTCGCCGCC CCGGACGGAA CCCCGTTCTT CTGTGGCACC TACTTCCCGA AGCCCAACTT CCTCCGGCTG CTCCAGTCGG TCACCACCGC CTGGCAGGAC CAGCGCAGCG CCGTGCTCCA GCAGGGTGCC GCGGTCGTCG AGGCGATTGG CGGTGCCCAG GCGGTCGGGG GTCCATCCGC CCCGCTCACC GTTGACCTGC TCGACGCTGC TGCCGACCGG CTTGGCGAGG AGTACGACGA GGCGAATGGC GGCTTCGGTG GGGCACCGAA GTTCCCGCCG CACCTGAATC TGCTCTTCCT GTTGCGGCGG TACCAGCGCA CCGGCGACCA GCGGAGCCTG GAGATCGTCC GGCACACCGC GGAGGCGATG GCCCGGGGCG GCCTCCACGA CCAACTCGCC GGGGGCTTCG CCCGCTACTG TGTGGACGGG CAGTGGGCGG TGCCGCACTT CGAGAAGATG CTCTATGACA ACGCCCTGTT GCTGCGCGTG TACACCCACC TGTGGCGGCT CACCGGTGAC CCGATGGCCC GCCGCGTGGC ACGGGACACG GCCCGTTTCC TCGCCGACGA GCTGCACCGG CCGGGCGAGG GGTTTGCCTC CGCGTTGGAC GCCGACGCCG ACGGGGTTGA GGGTCTGACC TACGTCTGGA CCCCCGCCCA GCTCGTCGAG GCTTTGGGCG AGGAGGACGG CCGGTGGGCC GCCGATCTGT TTGCGGTCAC CGAGCAGGGC TCGTTCACCC CGCACGCCGC CTCGCCGCCC GGCGAAGCCC GGAGTGGGGC GGAAGCCGCT GCGCAGTCGG CCAGCGTGCT TCGGCTGGCC CGGGACGTCG ATGATGCGAC GCCGGAGGTG CAGGCCCGCT GGCAGGAGAT CGCGCACCGG TTGCTGGTGG TCCGCGACGC CCGCCCGCAG CCGGCCCGTG ACGACAAGGT GGTAGCTGCC TGGAACGGGC TCGCGATCAC CGCGATCGCC GAGTTCCAGC AGGTCGCAGC CGGCTACGCG GAGGATGCTC CCGGGCCGGA CGCCAACCTG ATGGAGGGCG TGACGATCGT CGCCGACGGT GCCATGCGGG ACGCGGCCGA GCACCTGGCA AGGGTGCACC TCGTGGCCGG GCGGCTGCGG CGCACGTCGC GGGACGGCCG GGTCGGCGAG GCCGCCGGAG TCCTGGAGGA CTACGGCTGC GTGGCCGAGG CGTTCTGTGC GATGCACCAG CTGACCGGCG AGGGGCGGTG GCTGATCTTG GCGGGGCAGC TCCTCGACGT GGCGCTGGAG CGGTTCGCCG CACCACAGGG CAGCTTCTAC GACACCGCTG ACGATGCGGA GCGTCTGGTC AGCCGGCCGG CGGATCCCAC CGACAACGCC ACCCCGTCCG GCCGGTCGGC GATCGTCGCC GCGCTGGTCG CATACGCGGC GTTGACCGGC GAGACCCGCT ACCGGGAGGC GGCGGAGGCG GCGCTGGCCA CCGTGGCGCC GATCGTCGCT GCACACGCCC GCTTCACCGG GTACGCGGCC ACCGCCGGCG AGGCGCTGCT CGTCGGTCCG TACGAGATCG CGGTGGTGAC CGCCGATCCG GTCGGTGAGC CGTTGGTGCA CGCGGCGCAC CGGCACGCCC CGCCCGGCGC CGTGGTGGTG GCCGGGCGGC CGGACCAGCC CGGGGTGCCG CTGCTCGCCG GTCGGCAGAT GGTCGACGGG CAGGCCACCG CGTACGTCTG TCGGGGCTTT GTCTGCGACC GGCCGGTAAC CGGAGTTGAC GCCCTGGTGG CGCAGCTGAC GGGTCGGTAG
|
Protein sequence | MNRLAGATSP YLIQHKDNPV DWWPWCAEAF AEAHRRDVPI MISVGYAACH WCHVMAHESF ADEQVAALLN EGFVAIKVDR EERPDVDAVY MTATQAMTGQ GGWPMTVFAA PDGTPFFCGT YFPKPNFLRL LQSVTTAWQD QRSAVLQQGA AVVEAIGGAQ AVGGPSAPLT VDLLDAAADR LGEEYDEANG GFGGAPKFPP HLNLLFLLRR YQRTGDQRSL EIVRHTAEAM ARGGLHDQLA GGFARYCVDG QWAVPHFEKM LYDNALLLRV YTHLWRLTGD PMARRVARDT ARFLADELHR PGEGFASALD ADADGVEGLT YVWTPAQLVE ALGEEDGRWA ADLFAVTEQG SFTPHAASPP GEARSGAEAA AQSASVLRLA RDVDDATPEV QARWQEIAHR LLVVRDARPQ PARDDKVVAA WNGLAITAIA EFQQVAAGYA EDAPGPDANL MEGVTIVADG AMRDAAEHLA RVHLVAGRLR RTSRDGRVGE AAGVLEDYGC VAEAFCAMHQ LTGEGRWLIL AGQLLDVALE RFAAPQGSFY DTADDAERLV SRPADPTDNA TPSGRSAIVA ALVAYAALTG ETRYREAAEA ALATVAPIVA AHARFTGYAA TAGEALLVGP YEIAVVTADP VGEPLVHAAH RHAPPGAVVV AGRPDQPGVP LLAGRQMVDG QATAYVCRGF VCDRPVTGVD ALVAQLTGR
|
| |