Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0905 |
Symbol | |
ID | 5057348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1011101 |
End bp | 1012426 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640473174 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001157760 |
Protein GI | 145593463 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCCGA AGCGGATCCT TGTGGTGGGT GCCGGACACG TCGGGCTCTA TGCGGCGCTG CGGCTGTCGA AGAGGCTCGG CGCGCGGGAG GCCGAGGTTA TCGTGGTCGA CCCCCAGCCC CACATGACCT ATCAGCCGTT CCTCCCGGAG GCGGCGGCGG GCAGCATCTC GCCCCGGCAC TCCGTGGTGC CGTTGCGGCG GGAGCTGCGC AGGTGCACCG TCGTCGTGGG CGCGGTCACC CAGATCGACC ACGCCGCCAA GACCGCGTCG GTCCAGCCCA TCGTCGGTCC GACCCGCGAG ATCCGGTACG ACCAGGTGAT CATCGCCCCC GGCTCGGTCT CCCGGACCCT GCCGATTCCC GGGCTGCACG AGTGCGGCAT CGGCTTCAAG ACCATCGGTG AGGCGATCTA CCTGCGCAAC CATGTGCTGG ACCGGCTCGA TGTCGCCGCC GCCACGCAGG ACTCGGCGCT TCGCCGGCGG GCCCTGACGT TCGTCTTCGT CGGCGGCGGT TACGCCGGCA TCGAGGCGCT CGCCGAGATG GAGGACATGA CCCGGGCTGC GCTGCGGTAC TACCCGGAGC TGAGCCCGGA CGACATGCGG TGGGTGCTCG TCGAGGCGAC GCAGCGGGTG CTGCCCGAGG TCGATCCGGA CATGGGTGCC TACACGGTGC AGCAGCTCCT CCGGCGCAGC ATGGACATTC GGTTGGGGAC CCGGCTGGAG TCCTGCGTTG ACGGGCTGGT GAAGCTCTCC GACGGGGACA GCTTCCCGGC CGACACGATT GTGTGGACGG CTGGCGTGAA GCCGTCGCCG ATGCTGGATG CCACCGACTT CCCCCGCGAC GAGCGGGGGC GGATCACCTG TGAGCCCACG CTGCAGGTTG TTGCCGGCGA TCAGGTGGTG GCAGGGGCCT GGAGCGCCGG GGACTGCGCC GCGGTGCCGG ATCTGACGAA GGAGCCCGGC AGCTACTGCT CGCCGAGCGC CCAGCACGCG GTACGTCAGG CGAACCGGAT GGCCGACAAC ATCGTCAACG TCCTCCGGGG CCTGGAGCCG GTTCCCTACC AGCACCGGCA CGCCGGCAGC GTCGCCAGCC TCGGCCTGTA CAAGGGGGTC GCGCAGGTGT ATGGGATCAA GATGAAGGGC CTGCCCGCCT GGTTCATGCA CCGGACCTAC CACATGAGCC GGATCCCTTC GCTGAACCGA AAGGTCCGGG TGGTCGCGGA CTGGACGTTG GCGTTCTTCC TCAAGCGTGA GGTTGTCGCT CTCGGCCAGC TGCACGATCC GCGCGAGGAG TTCGCCGAGG CGTCCCAGCC GGTCAGCGCC CGCTAG
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Protein sequence | MNPKRILVVG AGHVGLYAAL RLSKRLGARE AEVIVVDPQP HMTYQPFLPE AAAGSISPRH SVVPLRRELR RCTVVVGAVT QIDHAAKTAS VQPIVGPTRE IRYDQVIIAP GSVSRTLPIP GLHECGIGFK TIGEAIYLRN HVLDRLDVAA ATQDSALRRR ALTFVFVGGG YAGIEALAEM EDMTRAALRY YPELSPDDMR WVLVEATQRV LPEVDPDMGA YTVQQLLRRS MDIRLGTRLE SCVDGLVKLS DGDSFPADTI VWTAGVKPSP MLDATDFPRD ERGRITCEPT LQVVAGDQVV AGAWSAGDCA AVPDLTKEPG SYCSPSAQHA VRQANRMADN IVNVLRGLEP VPYQHRHAGS VASLGLYKGV AQVYGIKMKG LPAWFMHRTY HMSRIPSLNR KVRVVADWTL AFFLKREVVA LGQLHDPREE FAEASQPVSA R
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