| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0879 |
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| Symbol | ispH |
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| ID | 5057322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 980300 |
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| End bp | 981283 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640473148 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001157734 |
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| Protein GI | 145593437 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAGG CTGAAGCGAT CCGGACCGGT AAGCGTGTGA TCCTGGCGAA GCCGCGCGGC
TACTGCGCGG GCGTCGACCG GGCGGTGCAG ACCGTCGAGG AGGCGCTCAA GCTCTACGGC
GCGCCGATCT ACGTCCGCAA GCAGATCGTG CACAACCGGC ACGTGGTGCG GACCCTGGAG
GGCAAGGGCG CGATCTTCGT GGAGGAGAAC GAGGAGGTGC CGGAGGGCGC GACCGTGGTC
TTCTCCGCGC ACGGCGTCGC CCCCGAGGTC CATGAGCAGG CGCGGAGCCG CTCGCTGAAG
GCTATCGACG CGACCTGCCC GCTGGTCACC AAGGTGCACC AGGAGGCGAA GCGGTTCGCC
GCCGAGGACT ACGACATCCT GCTGATCGGT CACGAGGGGC ATGAGGAGGT CATCGGCACC
GCTGGCGAGG CACCCGAGCA CATCCAGCTC GTCGATGGCC CTCAGGACGC CGAGCGGGTC
ACCGTCCGGG ATCCGAACAA GGTGGTGTGG TTGTCCCAGA CCACCCTGTC GGTGGACGAG
ACGTTGGAGA CGGTGGCCCG GTTGAAGAAG CGGCTGCCGA TGCTCCAGTC GCCGCCGAGC
GACGACATCT GCTACGCCAC CAGCAACCGG CAGCACGTGG TCAAGCAGAT CGCGTCGGAC
TGCGATGTCA TGATCGTGGT TGGCTCCACG AACTCGTCGA ACTCGGTGCG GCTGGTCGAG
GTGGCCCTGG ACGCGGGTGC GCGGGCCGGC CATCTCGTTG ACTTCGCCCG TGAGATCGAC
GACGCCTGGC TCGAGGGCGC CCGCACGGTC GGCCTGACCT CGGGGGCCAG CGTCCCCGAG
GAGCTTGTCC AGGAGGCTCT CGCGCACCTC GCGGCGCGGG GCTTCACCGA TGTCGAGGAG
GTGGTGACCG CGGACGAGCG GCTGACCTTC TCGCTGCCGC AGGAGCTGAA GCGGGACATG
CGGGCCGCAG CGGCCCACGG TTGA
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| Protein sequence | MSEAEAIRTG KRVILAKPRG YCAGVDRAVQ TVEEALKLYG APIYVRKQIV HNRHVVRTLE
GKGAIFVEEN EEVPEGATVV FSAHGVAPEV HEQARSRSLK AIDATCPLVT KVHQEAKRFA
AEDYDILLIG HEGHEEVIGT AGEAPEHIQL VDGPQDAERV TVRDPNKVVW LSQTTLSVDE
TLETVARLKK RLPMLQSPPS DDICYATSNR QHVVKQIASD CDVMIVVGST NSSNSVRLVE
VALDAGARAG HLVDFAREID DAWLEGARTV GLTSGASVPE ELVQEALAHL AARGFTDVEE
VVTADERLTF SLPQELKRDM RAAAAHG
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