| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0842 |
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| Symbol | |
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| ID | 5057285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 941550 |
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| End bp | 943568 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640473111 |
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| Product | ABC transporter, transmembrane region |
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| Protein accession | YP_001157697 |
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| Protein GI | 145593400 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.111523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTC CAGCCGTACC GAAGAAGAAC CAACCCGGCG AGGAGCCCAC GCCTCAGCGG
CTACCGTCCG GCGGCCAACG CGGCAGCGGG CCGTCCTGGC CGGGGCCCGG TATGCCGGCC
GAACGGTCGA TGTCCTTCGG GCCGTCGGCT CGGCGCCTCC TCGGCCGGCT ACGCCCGCAC
CGCCTCCCAC TGATCGGGGT AGTCGCCCTG GCGGTGCTCG GTGTCGGCCT GAACGTCATC
GGCCCGAGAG TGCTCGGCCA CGCCACCGAC CTGATCTTCG CCGGGGTGTT GGGGAGACAG
CTCGAACCCG GCACGACGAC GGAGGCCGCC GCCGCGGCGG CCCGCGCGGC GGGCAACGAC
AGCTTCGCCG ACATCATCAC CCGGATGGGC GTGGTTCCCG GCACCGGAAT CGACTCCGCC
GCGTTGGCCC GGGTGCTGCT GCTGGCGCTC GCCCTCTATG TCGCGGCGTC CCTGCTCATC
TGGGCGCAGG GTTGGCTGCT CACCGGGATG GTGCAGCGGA CCGTGCACCG GCTACGGGAA
GACGTGGCGG CCAAGCTGAA CCGGCTGCCC CTGCCCTACT TCGACCGACA GCCCCGGGGC
GAGTTGCTCA GCCGGGTCAC CAACGACATC GATAACATCT CGATCAGCCT GCAGCAGACC
CTGAGCCAAC TGCTCACCGG GCTGCTCACC GTGGTCGGGG TGCTCGCCAT GATGTTCTGG
ATCTCGCCGG TCTTGGCCCT GATCGCACTG GTGGCGGTAC CCCTGTCGGT CCTCGTCACC
CAGCAGATCG CGAAGCGGTC CCAGCCGAGG TTCGTCGCCC AGTGGACGCA CACCGCTGAG
CTCAACGGCC AGATCGAGGA GGCCTTCACC GGCCACGAGT TGGTCAAGGC TTTCGGCCGA
CAGCGGGCCG TGCAAACCTC CTTCGCGGCC AAGAACGAGG AGCTGTTCCA GGCCAGCTTC
GGGGCGCAGT TCATCTCCGG AATCATCATG CCGGCGATGA TGTTCATCGG GAACCTGAGC
TACGTGGCGA TCGCCGTGGT CGGCGGGCTC CGGGTCGCAT CGGGCACGAT GACCCTCGGC
GACGTGCAGG CCTTCATCCA GTACTCCCGC CAGTTCACCC AGCCGCTCAC CCAGCTCGCC
GCGATGATGA ACCTGCTCCA GTCCGGGGTC GCCTCCGCCG AGCGGGTCTT CGCGGTGCTC
GACGCCGAGG AGCAGACTCC GGAACCGGCC GTCCCGGCCC GACTTACCGC ACCCCGCGGA
CGGGTCGCGT TCGAGCACGT CTCCTTCCGG TACACCCCGG ACAAGCCGTT GATCGAGAAC
CTGTCGCTGA CCGCCGAACC CGGCCAGACG GTGGCGATCG TCGGGCCGAC CGGGGCCGGC
AAGACCACGC TGGTCAACCT GGTGCTGCGC TTCTACGAGC TGAACGCCGG TCGGATCACC
CTCGACGGAG TGGACATCAC CGGGCTGCGC CGGGACGACC TGCGCGGCCG GATCGGCATG
GTGCTCCAGG ACACCTGGCT GTTCACCGGC ACCATCCGAG AGAACATCGC CTACGGCCGA
CCCGACGCCA CCGAGGAGGA GATCCTGGCG GCGGCCCGGG CGACCTTCGT GGACCGATTC
GTACGCAGCC TGCCCGATGG CTACGACACC GTGATCGACG AGGAGGGGAG CAACATCAGC
GCTGGCGAGC GGCAGCTCAT CACCATCGCC CGCGCCTTCC TCGCCGAGCC GTCGCTGCTG
ATCCTCGACG AGGCCACCAG CTCCGTGGAC ACCCGGACCG AGGTGCTGCT CCAACGGGCG
ATGGCGGCAC TGCGATCCGA CCGCACCAGC TTCGTGATCG CACATCGCCT CTCCACCATC
CGCGACGCCG ACCTGATCCT GATGATGGTG GACGGACGCA TCGTCGAACA GGGCAGCCAC
GACGAACTGC TCGCGGCCGA CGGCCCGTAC GCCGGCCTGC ACCGATCCCA GTTCACGCAG
GGCCGACCGA CCGAGTCCGA GCCGGTCCCG GCTCCGTAG
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| Protein sequence | MSAPAVPKKN QPGEEPTPQR LPSGGQRGSG PSWPGPGMPA ERSMSFGPSA RRLLGRLRPH
RLPLIGVVAL AVLGVGLNVI GPRVLGHATD LIFAGVLGRQ LEPGTTTEAA AAAARAAGND
SFADIITRMG VVPGTGIDSA ALARVLLLAL ALYVAASLLI WAQGWLLTGM VQRTVHRLRE
DVAAKLNRLP LPYFDRQPRG ELLSRVTNDI DNISISLQQT LSQLLTGLLT VVGVLAMMFW
ISPVLALIAL VAVPLSVLVT QQIAKRSQPR FVAQWTHTAE LNGQIEEAFT GHELVKAFGR
QRAVQTSFAA KNEELFQASF GAQFISGIIM PAMMFIGNLS YVAIAVVGGL RVASGTMTLG
DVQAFIQYSR QFTQPLTQLA AMMNLLQSGV ASAERVFAVL DAEEQTPEPA VPARLTAPRG
RVAFEHVSFR YTPDKPLIEN LSLTAEPGQT VAIVGPTGAG KTTLVNLVLR FYELNAGRIT
LDGVDITGLR RDDLRGRIGM VLQDTWLFTG TIRENIAYGR PDATEEEILA AARATFVDRF
VRSLPDGYDT VIDEEGSNIS AGERQLITIA RAFLAEPSLL ILDEATSSVD TRTEVLLQRA
MAALRSDRTS FVIAHRLSTI RDADLILMMV DGRIVEQGSH DELLAADGPY AGLHRSQFTQ
GRPTESEPVP AP
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