Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0783 |
Symbol | |
ID | 5057225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 870378 |
End bp | 871325 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640473051 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_001157638 |
Protein GI | 145593341 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.234509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGG CATGGCGACC GGAGGATGAC GAACCGCGAG GTGCCAGCGG GCCGGTCCGC GTACGGGTCC CCGCCAAGAT CAACCTGCAC CTGGGGGTGG GGCCGCTACG CCGGGACGGC TATCACGAGC TGAACACGGT CTACCATGCG ATCTCCATTC ACGACGAGTT GACTGCCCGC CGGGGCGACA CCCTCACTCT GACGATGGAG GGCGAGGGGG CCGGCGAACT GGCCCTGGAC GAGTCAAACC TGGTCATTCG CGCCGCCCGC GCCCTCGCCG GCTCCACCGG CGTGCCGCCG CACGCCCGGC TGCACCTGCG CAAGCAGATC CCACTGGCCG GTGGGCTCGC CGGAGGTAGC GCCGATGCCG CCGCCGCGCT GGTTGCCTGC GATGCCCTCT GGGGGACCGG GCTGACTCGT GACGAACTGG CGGAGATCGC CGCCGGCCTC GGTTCCGACG TGCCGTTCCT GATCCACGGG GGCACCGCCC TCGGCACCGG CCGGGGAGAG GCGGTCAGTC CGGTCCTGGC CCGGCCGACC GTCTGGCACT GGGTCGTCGC GGTCGCCGAC GGCGGCTTGT CCACGCCGGT CGCGTACCGG GAACTCGACC GGCTCCGAGC TGCCGGGGCC GCCGGCCCCC CGCTCGGCAG CACCGACACC CTCCTCGCCG CGCTACGGCA GCCCGACCCC CGGGTGCTCG CCGCGGCCCT CGGTAACGAC CTCCAGGACG CCGCGCTCGC ACTGCGGCCC GCCCTGGCCG CCACCCTGAA GGCGGGTGAG GCGGCGGGAG CGCTCGCGGG CATCGTCTCC GGCTCCGGGC CGACCTGTGT CTTCCTCGCC GCCGGAGCGG CCGACGCGGA GCGGATCGCC GCCGAGTTGA GCGCCCTCGA CGTGTGCCGA CAGGCCCGCA CCGCGCACGG CCCGGTCGCC GGGGCCCGGA TCGGCTGA
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Protein sequence | MTEAWRPEDD EPRGASGPVR VRVPAKINLH LGVGPLRRDG YHELNTVYHA ISIHDELTAR RGDTLTLTME GEGAGELALD ESNLVIRAAR ALAGSTGVPP HARLHLRKQI PLAGGLAGGS ADAAAALVAC DALWGTGLTR DELAEIAAGL GSDVPFLIHG GTALGTGRGE AVSPVLARPT VWHWVVAVAD GGLSTPVAYR ELDRLRAAGA AGPPLGSTDT LLAALRQPDP RVLAAALGND LQDAALALRP ALAATLKAGE AAGALAGIVS GSGPTCVFLA AGAADAERIA AELSALDVCR QARTAHGPVA GARIG
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