| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0759 |
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| Symbol | |
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| ID | 5057201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 842127 |
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| End bp | 843407 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640473027 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001157614 |
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| Protein GI | 145593317 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.561575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCTC AACAGACCCC AGGCCGGTCT CGATGGCGCG TGGCTGTCGC CGCCGCGCTG
CTGACAGCCG TCACCGCCTG CACCGGCTCG AGCCTCGGTG GCGCGGACAA CAGCGGTGAG
GAGATCCGCA TCGGCCTGAT CGTGCCGAAG TCCGGCCCCT ACAAGTCGGT CGGAGACGAC
CAGGTTGCCG GGTTTCGGCT GGCCCTGGAG AAGCTGGGCG GCGAGCTCGG CGGTCGACCC
GTCAAGGTGA TCGAGGCGGA CGAGGGCGAC GGCAAGGCCA CCGCGCTCGC GTCGGCGCGC
AAACTGATCG AGCAGGACAA GGTCCTCGCC CTGGTCGGCG GGGCGACCGC GGACACGGTG
CAGACCGTGT ACCCGCTACT GAAGGAGTCC GGGGTGCCGC TGATCGGCAT CGGCGGACGG
CCATCAACAG TGGAGGATCC GAGCTACCTC TGGTCCACAT CCTGGTTGAG TCAGGAGACC
GGCGCCGCGA TCGCTGGCTA CCTGCGTGAG CAGGTGGGCG ATGACCGGGT GTGGGTGATT
GGCCCGGACT ACATCGGGGG TCACGACCAG ATCAACGGGT TCGTGGACGC CTTCCGTGAG
GCCGGCGGAA AGCTGGCCAA TCCGGGTGGG GAACCGACGT GGACGCCGTG GGCGCCGACG
CCGACGACGG AGTTCTCCCC GTATCTGACA AAGATCAAAA ATTCCGATGC CGCGGCGGTC
TACACCTTCT ACGCCGGCAC CAGCGCCGTC GAGTTCGTCA AGCAGTACCG GCAGTACGGA
GTAGATGTGC CGCTGTACGC CTCAGGCTTC CTGACCGAGG GCGCGCCGCT GGCGGCACTC
GGAGAGCAGG CTGCGGGAAT CTACACCAGC CTGAACTACT CGACGACGTT GGACAACGCC
GCCAACCGTG ACTTCGTGCG CCGCTACAGC GCGGCCAACG ACGGGGAGCT GCCAAACCTG
TTTCACGTCT CCGCCTGGGA TGCCGTACTC GTGCTGGACC AGGTCATCAC CGAGGCGCTC
AACGGCTCGG ACACTGCGGC GACGACGGGT ACCACCCCGG CCAGTCAGGC CGCTGCCGAC
GAGGCGACCG GTGGGTTGAC ATCGGAGTCG CTGACGGCGG CGCTGTCCCG GATCGGCTCG
ATCGACTCGC CCCGGGGCGC CTGGCAGTTC GGTCCAACAA ACCACACCCC GGTGCAGGCG
TACTACCTGC GCGAGGTAGC CCAGGACGGA CAGGTGTGGG TCAACCGAAC CGTGCAGACG
CTGACCACCC TCGGTTCCTG A
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| Protein sequence | MTSQQTPGRS RWRVAVAAAL LTAVTACTGS SLGGADNSGE EIRIGLIVPK SGPYKSVGDD
QVAGFRLALE KLGGELGGRP VKVIEADEGD GKATALASAR KLIEQDKVLA LVGGATADTV
QTVYPLLKES GVPLIGIGGR PSTVEDPSYL WSTSWLSQET GAAIAGYLRE QVGDDRVWVI
GPDYIGGHDQ INGFVDAFRE AGGKLANPGG EPTWTPWAPT PTTEFSPYLT KIKNSDAAAV
YTFYAGTSAV EFVKQYRQYG VDVPLYASGF LTEGAPLAAL GEQAAGIYTS LNYSTTLDNA
ANRDFVRRYS AANDGELPNL FHVSAWDAVL VLDQVITEAL NGSDTAATTG TTPASQAAAD
EATGGLTSES LTAALSRIGS IDSPRGAWQF GPTNHTPVQA YYLREVAQDG QVWVNRTVQT
LTTLGS
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