Gene Strop_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0701 
Symbol 
ID5057142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp788539 
End bp788916 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content66% 
IMG OID640472968 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 3 
Protein accessionYP_001157556 
Protein GI145593259 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.551532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGTT ACCTGGGCTC ATACGCGACG CTCGGGCTCC TGCTCCTCGC CAGCCTTCTC 
TTCTTCGGGA CGGCCTTCTC CGTCAACCGG GTGTTGCGCC CGGCCCGCCC CGCCGAGCCA
CCCGGTAAGC GCGAGGCCTA CGAATGCGGG CTGGACCCGG TGGGTGGTGA CTGGGCCCAA
GCCCAGATCC GTTACTACGT GTACGCCTAC CTGTACGTGC TGTTCGCAGT CGAGGCGGTG
TTTCTCTTTC CCTGGGCTGT GATCTTCGAC CGGCGCGGCT ATGGGCTGGT CACCGTGGTG
GAGATGGCGA TCTTCGTGGC GGTGCTGGCG CTGGGCATCC TCTACGCGTG GCGGAAGAAC
ATCCTGCGCT GGACCTGA
 
Protein sequence
MTGYLGSYAT LGLLLLASLL FFGTAFSVNR VLRPARPAEP PGKREAYECG LDPVGGDWAQ 
AQIRYYVYAY LYVLFAVEAV FLFPWAVIFD RRGYGLVTVV EMAIFVAVLA LGILYAWRKN
ILRWT