Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0691 |
Symbol | |
ID | 5057132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 778151 |
End bp | 779071 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640472958 |
Product | formyl transferase domain-containing protein |
Protein accession | YP_001157546 |
Protein GI | 145593249 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGGATCG TCTTTTTCGG CTACGGCGAG CTAGGCGCCA TCGTGCTGCG AGGCATCGCG CCGCACCACG AAGTGCTGCT TGTATTAACC CACCCGGTTG AATTCAGTAA ACTCGGCGAG CCGGACGTTG AGCTAGCTGC AGCCGAACTG GGACTGCCAG TGCGCTACTC GGCTACCGCC CGCGAACCCG ACCTGCACGA GCATCTGCGC GACCTCGCGC CGGAGGTCAT CGTCTCCACT AACTGGCGGA CCAGGGTTCC CTCGGAGGTG CTGCGGATCC CCGAACGCGG CGCGGTCAAC ACGCACGATG CGCTGCTGCC CGCCTATGCG GGGTTTGGCG CGGTCAATTG GGCGATCCGC AACGGCGAGG AGGAGACCGG CCTCACCGTG CACTACATGG CCGAGGACCT GGACACCGGG CCAGTCATCA CTCAGGCTCG TGTGAAGATC GGGGTGCATG ACACCGCCGG ACAGATTCTG GAGCGGCTAC TCGCGGAATA CGTGCCAGTC ACACTGGAGG CGTTGAACCG GGTCAACGCG GGGTACCAGG GCAAGCCGCA ACCGCCCGAG GGGGCGTCGT TCTACCACCG GATCGGGGTC GAGGACACCC GAATTGACTG GCGGGACAGC GCCACCACGA TCTGCAACCT GGTACGCGGC CAGTCGGATC CGTTCGTCAA CGCGTGGACG ACGTACCGCG GGCTCCCGCT CTGGATCAAA ACTGCTGCCC GGCCGACCCG GGCGCACGGT GGCACGCCTG GCCGGATAGT CAAGGCCGAC TATGGTGGTG TGGTCGTCGC CAGCGGCGGC CCGCGTGACG GTGACGACCG CGGGGTGGTG CTGCTTCAGG TCCGTACCGA GACCGGCCCA CCAGTGCGCG CCCTCGACTA CTTTGCCGCC TTCGGCGAGT ACCTTCACTG A
|
Protein sequence | MRIVFFGYGE LGAIVLRGIA PHHEVLLVLT HPVEFSKLGE PDVELAAAEL GLPVRYSATA REPDLHEHLR DLAPEVIVST NWRTRVPSEV LRIPERGAVN THDALLPAYA GFGAVNWAIR NGEEETGLTV HYMAEDLDTG PVITQARVKI GVHDTAGQIL ERLLAEYVPV TLEALNRVNA GYQGKPQPPE GASFYHRIGV EDTRIDWRDS ATTICNLVRG QSDPFVNAWT TYRGLPLWIK TAARPTRAHG GTPGRIVKAD YGGVVVASGG PRDGDDRGVV LLQVRTETGP PVRALDYFAA FGEYLH
|
| |