| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0670 |
|---|
| Symbol | |
|---|
| ID | 5057111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 752580 |
|---|
| End bp | 754133 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640472937 |
|---|
| Product | amino acid adenylation domain-containing protein |
|---|
| Protein accession | YP_001157525 |
|---|
| Protein GI | 145593228 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGTAG ACAATCTCAC CCTATTCCAG GGGTTCGCCG ACGTCGTCCG TCGCCATCCC
GACTCCCTAG CGTTGCGCGT CGCCGGACAC CAGCTCACAT ACGCCGAACT CCTAGACCAC
GTCGAACGGC TGGCCACCCG ACTGGTCGAA CTGCATGGCC AACCGCCTCG GACCGTTGGG
CTCTGCGCGT CGCGCAGCCT CGCGGCATAC GTCGGATATC TGGCCACGCT GCGGCTGGCT
GCGACCGTCG TACCGTTGGG AGTCGATGTA CCAGCGGAAC GTATTCGACG CACCTGCGCC
CACGCTGGGG TAGACGCCCT ACTCGCTGAC GACGCGGGCC GGCGGGTGGC CGACGAAGCA
GCCGGAACGA TCAAGGTTCT GTACCTGCCT GACACCCCGG AGCACCACTG GTACGACGTA
CCCACTCAAC GGTGGACGGA ACCATACGTC GGGGACCCCG AGGACGTCGC CTACATCCTG
TTCACCTCCG GCTCCACCGG AACGCCCAAG GGAGTGCCGG TCCGCCACCG CAACCTCATT
CCCTACATGG CGCACTGCAT CGAGACATAC CAGGTGCAGC CGGGGGCAAG CCTGTCGCAG
ACCTTCGAGC TGACCTTTGA CCCATCGGTA TTCGACATGT TCGTCACCTG GCTGTCCGGA
GCGCTGCTGG TGGTCGCCGC GCCTAACGAT CTACTTGCAC CCATCCGCTA CGTCAACGAC
AACCAGATCA CCCACTGGTT CTCAGTACCG TCAGTGATCT CCCTCGCTGG CCGCCTGCGA
AGCCTGCGTC CTGGCAGCAT GCCCAGCCTG CGGTGGAGCC TCTTCGCAGG CGAGCAACTC
ACCCTGACCC AGGCGCGGGC GTGGGCGGAC GCCACGCCCG GCAGCACCCT GGCAAACCTG
TACGGGCCTA CCGAACTAAC AGTCACCTGC ACCCGCTACC AACTTCCTGC CGATCCCGCG
CGGTGGCCGC GAACCAGCAA CGACACCGTT CCTATCGGGC GTGTCCACCC ACACCTGGAG
GGGGTTTTGC TCGCACCCGA TGGGACCGCC GGCAACGAAG GCGAGCTTTG CATACGGGGC
AGCCAACGGT TCGACGGCTA CCTCGACCCC GCCCAAAACC ATGGCCGATT CGTCGACCAC
ACCGACGGCC GGACGACCCA GGTTGATCGG CTGCCCGGCC CACAGAACTG GTACCGGACG
GGGGACCGGG TCCGCCAGGA GGATGGCGAA CTGGTCCACC TAGGCAGGAT CGACGACCAG
GTCAAAATCC ACGGATACCG GATCGAGCCG GGCGAAATCG AGTCAGTCCT GCGCCGACAT
CCGAGCCTGC ACGAGGTCGT TGTCCTGGCG GTGCCCGCCC GCGCAGGTGG AGTAGAGCTA
CACGCATTGT ATACCTGCGA CTCACTGGCG GAGACGGCGC TAGCTGGGCT GGTGGCCGAG
CACCTGCCGC CTTACATGGC ACCAACGCAA TACCACCACG TCGAATTCTT CCCGGTCAAC
GCCAACGGCA AGGTCGACCG CCGTCGCCTC GCGGCCGACG TGGGGTTGGT CTGA
|
|---|
| Protein sequence | MNVDNLTLFQ GFADVVRRHP DSLALRVAGH QLTYAELLDH VERLATRLVE LHGQPPRTVG
LCASRSLAAY VGYLATLRLA ATVVPLGVDV PAERIRRTCA HAGVDALLAD DAGRRVADEA
AGTIKVLYLP DTPEHHWYDV PTQRWTEPYV GDPEDVAYIL FTSGSTGTPK GVPVRHRNLI
PYMAHCIETY QVQPGASLSQ TFELTFDPSV FDMFVTWLSG ALLVVAAPND LLAPIRYVND
NQITHWFSVP SVISLAGRLR SLRPGSMPSL RWSLFAGEQL TLTQARAWAD ATPGSTLANL
YGPTELTVTC TRYQLPADPA RWPRTSNDTV PIGRVHPHLE GVLLAPDGTA GNEGELCIRG
SQRFDGYLDP AQNHGRFVDH TDGRTTQVDR LPGPQNWYRT GDRVRQEDGE LVHLGRIDDQ
VKIHGYRIEP GEIESVLRRH PSLHEVVVLA VPARAGGVEL HALYTCDSLA ETALAGLVAE
HLPPYMAPTQ YHHVEFFPVN ANGKVDRRRL AADVGLV
|
|---|
| |