| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0669 |
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| Symbol | |
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| ID | 5057110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 750671 |
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| End bp | 752539 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640472936 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_001157524 |
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| Protein GI | 145593227 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCA CCCGGCAAGC ATCACCCGCC CGCCCGCGTT TCCGGTTGAT GGGACCGATG
GAGATCTACG ACGGCGTTCA GTGGCAGGGG ATCGGATCCG CCAAACAACG CGCGTTGCTG
GCGGTTCTAC TGCTTAAAGC CAACCAGGCG GTATCGCTTG AACAACTGAT AGCTGAACTC
TGGGACGATC ATCCGCCGAC CTCGGCCAGC AACCTGGTCG CCGGGTACGC CTGGCGGCTG
CGCCGTGCCC TCGACGACCG CGACGGCGAG TTCCTGACCA CCCGCAGCCC CGGCTACCGC
CTGGTGGTCG CTGCGGAGTC AATCGACATT GGCGAGTGCA AACGGCTCAT CCGGCAAGCC
CACGCCGACC TCGCGGCCGG CCTGCCGGAG GCCGCCGTCG AGGGGTTCGA CGCGGCGTTA
GCGCTATGGC GCGGCGTCCC GCTAGCCGAC GTCCGACCTA CCCCGCTAGT GACAGCTGAA
GTGGCTCGCC TGGAAGAGAC CCGGATCGCG ACGGTCGAGG CGCGCATCGG TGCGGAGCTC
GAGCTGGGCC GACACGGCAT GCTGCTGCCA GAACTCAAGG TACTCGTCAA CCAGCACCCC
CTGCGAGAGC GCCTGCACGC CCAACTGATG ACTGCCCTGT ATCGCGATGG ACAGCAGGCA
GTCGCCCTGG GCGTGTACCG CGACCTGCGG CGGCTGCTCG TCGACGAGTT AGGCATCGAG
CCCAACGTGT CGCTACGAAA CCTCGAACAG CGGATTCTTC GCAACGACCC GTTGCTGCGG
CTGTACCGCG ACGGAGCCCA TCCACCCGCC CGGACGACTA CGTCCAGCCC GCTGGCCAAC
CGGTTCCCCA CCGATCCGGT GGCCCTATAT GGTCGGCGTT CCCAGCTGGA CAGGTTAGTC
AGCGGGGTGC GGTCCGGACG GCTGGGCCTG GTTCAAGGCC TAGCCGGGGC TGGCAAAACC
GCCCTGGCAG TGCGCGCCGC CCACGAACTG AGCACACAGT ATCTCGGCGG ACCGGTGTTC
GTGCCCATGG GCGGGGGCAC GCCCGACGGC CCGGTAGAGG CCGCCCGGGT GGTAAGTGTC
CTGGCCAAAG CACTCGGGCT ATCGCCGCCG ATAAGCGACC ACCCCGCGTC GGACTGGTCA
ACCCTGCTGA CCGGCCGTCG GATCCTGGTC GTCCTCGACG ACGTGGCAAC CGCCGCGCAG
CTACGTGTCC TCGGGCCGGT GCCTGTTGAT TGTGCCTTGA TCATCATCTC ACGGTCCGGA
TTGACAACCC TAGATGGCGC CTTTGGCGTC TATGTTGGTT CGTTGGACAC CGAGGACGCG
CTCGACGTCC TTCGCTACCA CCTCGGTGCC GAACGGGTGG ACGCCGAACC CGAGGCAGCG
CGGACTCTGG TGCAGCGCTG CGATGCGCTG CCCCTTGCCT TGCGGATAGC GGCTGCCCGG
CTTCAGACTC GGCAGAGCTG GTCGCTGACC GCGTTCGTTT CCCGGCTAGC CGACCCTGCC
TGTCGACTCG ATGCTCTGGT CTGCGAGTCG ATGACGATGC GGGAGTCGCT GGCAGCCGCA
GTGCGGGTGC TTGCGCGATA CGGCGACGGC GTAGCGCGGC GCGTGCTGCG TCTGCTCAGC
CGACTCAACC AGGACGCCGT CAGCGTGTCA CGGCTCGCCG AGCTGTCGGG TCAATCGATG
GCCGCCGCAG AGATCGCTGC TGAACACCTG GTCGATGCAG GGCTTGCCGA GGCACTACCG
AACGGGCACT ACTGGATTCC CGAACTCGTT CGCGCCTACG TGCGTGAAAT GGACCCATTG
TGCAGTGTGA CCAGTCCGTT GCCCTGCAAA GCCAGCGTCC CCCCCACGTC CGCCCGGCCG
AGCGACTAA
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| Protein sequence | MPITRQASPA RPRFRLMGPM EIYDGVQWQG IGSAKQRALL AVLLLKANQA VSLEQLIAEL
WDDHPPTSAS NLVAGYAWRL RRALDDRDGE FLTTRSPGYR LVVAAESIDI GECKRLIRQA
HADLAAGLPE AAVEGFDAAL ALWRGVPLAD VRPTPLVTAE VARLEETRIA TVEARIGAEL
ELGRHGMLLP ELKVLVNQHP LRERLHAQLM TALYRDGQQA VALGVYRDLR RLLVDELGIE
PNVSLRNLEQ RILRNDPLLR LYRDGAHPPA RTTTSSPLAN RFPTDPVALY GRRSQLDRLV
SGVRSGRLGL VQGLAGAGKT ALAVRAAHEL STQYLGGPVF VPMGGGTPDG PVEAARVVSV
LAKALGLSPP ISDHPASDWS TLLTGRRILV VLDDVATAAQ LRVLGPVPVD CALIIISRSG
LTTLDGAFGV YVGSLDTEDA LDVLRYHLGA ERVDAEPEAA RTLVQRCDAL PLALRIAAAR
LQTRQSWSLT AFVSRLADPA CRLDALVCES MTMRESLAAA VRVLARYGDG VARRVLRLLS
RLNQDAVSVS RLAELSGQSM AAAEIAAEHL VDAGLAEALP NGHYWIPELV RAYVREMDPL
CSVTSPLPCK ASVPPTSARP SD
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