| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0634 |
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| Symbol | |
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| ID | 5057075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 715559 |
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| End bp | 716920 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640472903 |
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| Product | low molecular weight phosphotyrosine protein phosphatase |
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| Protein accession | YP_001157491 |
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| Protein GI | 145593194 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase
[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.37234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGAGA ACAGACCGAT GACCCCCACC CTGTGGCGGC GCCTGCTGGC CGAGTTCACC
GGCACCGCCC TGCTGGTTAC CGCCGTGGTC GGCTCCGGCA TCATGGCCGC CACCCTCTCC
CCGGCCGACG TCGGCCTGCA GCTGCTGCAG AACTCGATCG CCACCGCCTT CGCCCTCGGC
ACGCTGATCC TGATCTTCGG GCCGGTATCC GGCGCGCACT TCAACCCCGT CGTCTCCATC
GCCGACTGGT TCCTCGGCCG CCGCACCGGC ACCGGCCTCA CCGCCCGCGA CCTGGGCGGC
TACGTCGTGG CGCAGGTGCT CGGTGCGATC GCCGGTTCGG TGCTGGCGAA CCTGATGTTC
GACCTCGCCG CCGTCGACCT CTCCGGCAAG GACCGCGCCG CCGGGCACCT GTGGCTCGGC
GAGGTCGTCG CCACCGCCGG CCTGATCCTG ATCATTTTCG CCCTCGCTCG CTCCGGCCGC
GCCCCGATCG CTCCCGCCGC CGTCGGCGCC TACATCGGCG CCGCGTACTG GTTCACCTCG
TCGACCTCGT TCGCCAACCC GGCCGTCACC GTCGGCCGCG CGTTCACCGA TACCTTCGCT
GGCATCGCCC CCAGCTCCGT ACCCGGGTTC GTCCTCGCCC AACTCGTCGG ACTCGCCGTC
GGCGTCGGTC TCCTGGCCGC GCTCTACCCC GACGCCGGGC AGGCCGCCGA CCACGTGGTC
GTGCCCCTCC CACGACAGCG GCCCGGCGCT CGGCCACAAC AGCCTCCCCG ACCCGCACCT
GCCCGCGATC TCCGACGAGG CTCCGGTCAA CCGGTCCCGC AATCCGCACT GCATGAAAGG
CTCGTGATGT CCGACAAGCC CAGCGTCCTG TTCGTCTGCG TCCACAACGC CGGCCGTTCC
CAGATGGCCG CCGGATGGCT GCGCCACCTC GCCGGCGACA CCGTCGAGGT CCGCTCCGCC
GGCAGCGCAC CCGCGAAGAC CGTCAACCCG GCCGCCGTCG AGGCGATGCG GGAGGTCGGC
ATCGATATCA CCGACCAAAC CCCCAAACTC TTCGAGTACG CCACCGCGGA GTCCTCGGAC
GTGATCGTCA CCATGGGCTG CGGCGACGCC TGCCCCGTCT TTCCCGGCAA GCGCTACGAG
GACTGGAAGC TCGACGACCC TGCCGGCAAG GGCGTCGACG CCGTCCGCCC GATCCGTGAC
GACATCCGTA CCCGGGTGGA GAAGCTCCTC GCCGAGCTGC GCCCCGCCGT CGGAGAGGTT
GACCGCGACG TAGCCGGCGG CGGTGACGGC CAGGTGCGGT TGTCGGCGCG GTTGTCGGGT
GAAGGCCGGC ATCTTCGGCC CGGCGGCACC AATGGCGTTT GA
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| Protein sequence | MGENRPMTPT LWRRLLAEFT GTALLVTAVV GSGIMAATLS PADVGLQLLQ NSIATAFALG
TLILIFGPVS GAHFNPVVSI ADWFLGRRTG TGLTARDLGG YVVAQVLGAI AGSVLANLMF
DLAAVDLSGK DRAAGHLWLG EVVATAGLIL IIFALARSGR APIAPAAVGA YIGAAYWFTS
STSFANPAVT VGRAFTDTFA GIAPSSVPGF VLAQLVGLAV GVGLLAALYP DAGQAADHVV
VPLPRQRPGA RPQQPPRPAP ARDLRRGSGQ PVPQSALHER LVMSDKPSVL FVCVHNAGRS
QMAAGWLRHL AGDTVEVRSA GSAPAKTVNP AAVEAMREVG IDITDQTPKL FEYATAESSD
VIVTMGCGDA CPVFPGKRYE DWKLDDPAGK GVDAVRPIRD DIRTRVEKLL AELRPAVGEV
DRDVAGGGDG QVRLSARLSG EGRHLRPGGT NGV
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