Gene Strop_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0593 
Symbol 
ID5057034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp667278 
End bp669140 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content67% 
IMG OID640472863 
ProductFG-GAP repeat-containing protein 
Protein accessionYP_001157451 
Protein GI145593154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.618289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGT CACTGCGTCG CATGCTGCCC GGAGCGTTGG CGACGGTCCT CGTCGCCGCT 
ATCGGCGTTT TCACCGTCCG GCCGGCGCCC GATCCGGGCG AGATGGACGT TCTCGCTGCC
CGCTTCGCCT TCGAGGTGCA CCCGCTGAAC ACCGCCCCTG CGGGAGCCCA GCATGTTCGT
GTTGTCGCGC CCGACGTATC GGGCATTCGG TCCTGGATAT CCGCTGTGGG CGCTGCGGTT
GCGCTGCTCG ACGCCGATGG CAATCGACGT CACGACGATG TGTGCCTGGT CGACCCGAGG
GACGACTCAG TTCGGGTCTT CCCGGTACCC GGAACCGGCG ACCGGTACCC AGCAGCGTCC
CTGTCTCCTC CACCCGGCCC GATTGACCAT TTCGCGCCAA TGGGTTGTGT CCCAACCGAC
CTGGACGCAG ACGGCGACAG CGACCTGATT GTCTACTACT GGGGTCGGTC GCCAGTGCAG
TTCCTGCGGA TCGGTGCCGG ATGGCATCCA GTGGAGCTGG TCCAGCCAGC GCAGGTGTGG
AACACGACCG CACTGGTCGT GGGTGACCTG GACGGCGACG GCGCGCCGGA CGTCCTGGTG
GGCAACTACT TTCCCGATGG CGCAAGACTG CTTGACCCGG GAGCGGCCGG AGACGGGCGG
ATGCACATGC AGGCGGGTAT GGCGGACGCC GGCAACGGGG GGACGAACCG AGCCTTTCTT
TCCCGCCCCG GGCCTCCGGA CACAGCACCG GCCTGGCTCG ATGCCTCCAC CGGCGTGCCG
GACCGTGCCG CGCGGTCGTG GACGCTCGCC TTCGGCCTAC AGGACCTGAC GGGAGACTTG
CTGCCGGAGG TCTACCTCGC CAACGACTTT GGCCCGGATC ACCTGTTGGT TAATCACTCC
CGGCCGGGGC AGCTGGATCT GCGTCCGGTT GTGGGAACAC GGAGCGCGCT GGTGCCAAAG
TCCAAGGTGC TGGGCCGTGA CTCCTTCAAG GGCATGGGTG TCACCTACAC CTATCCGGAC
GGCGCTGAGC TGCCCACGAT CGTGGTCAGC AACATCACCA CTCCATGGGG TCTACAAGAG
AGTAACTTCG CTTTCACCCC GACTGGACCG GGCGCAGACC TGCTCGACGG TCGACTGCCC
TACAAAGACC GTAGCGAGGC ACTGGGCCTC TCCCGTAGCG GGTGGGCCTG GGACGTCAAG
GCGGTCGACT TCGACGGCGA CGGCAATGAC GAGTTGCTGC AGGCGACGGG CTTCGTGGCC
GGAAAGCGGT GGCGCTGGCC CGAGCTCCAG GAACTTGCCA TGGCCAACGA TCAGCTGCTC
CAGCACCCAT GGGCCTGGCC CCACTTTCGT CCGGGTGACG ACATTTCGGG GCACCAGGCC
AACGTGCTCT GGACGCGGCA TGGTGGACGG TACATTGACA TCGCCCCGCA GAGCGGGCTT
GGCCACCGAG ATGTCAGCCG CGGTATCGCC ATTGGCGATG TGGACCTCGA CGGTCGGCCG
GATGCGCTGG TGGCCAACCA GTGGCAGGAC AGCCGGCTGG TGCTGAACCG GTCTCGGTCG
ACCAGCCAGT CAACACTGAT CCTCAAACGG GCCGGCGAGG GCGGACGGCA GACCACACTC
GCTCTCGGTG CGTCCGTGGT CGCTCGGCCG GGCGACGGCC GGCCGGACCT GCGGGCCCAG
CTCTATCCCA GCAACGGACA CGCGGGGGTA TCCAGCCCCG AGCTCTTCTT CGCCGTCGAC
GGGATCACCC CGTTCGTGGT GTCATGGCGT ACGGCGGGCG GGGTGCGGAC CGCGCAGGTT
AGTCTGGGAC CGGGCCGGCA CGAACTCGTG CTACACGACG ACGGCCAGGT GGCCACGCGA
TGA
 
Protein sequence
MSMSLRRMLP GALATVLVAA IGVFTVRPAP DPGEMDVLAA RFAFEVHPLN TAPAGAQHVR 
VVAPDVSGIR SWISAVGAAV ALLDADGNRR HDDVCLVDPR DDSVRVFPVP GTGDRYPAAS
LSPPPGPIDH FAPMGCVPTD LDADGDSDLI VYYWGRSPVQ FLRIGAGWHP VELVQPAQVW
NTTALVVGDL DGDGAPDVLV GNYFPDGARL LDPGAAGDGR MHMQAGMADA GNGGTNRAFL
SRPGPPDTAP AWLDASTGVP DRAARSWTLA FGLQDLTGDL LPEVYLANDF GPDHLLVNHS
RPGQLDLRPV VGTRSALVPK SKVLGRDSFK GMGVTYTYPD GAELPTIVVS NITTPWGLQE
SNFAFTPTGP GADLLDGRLP YKDRSEALGL SRSGWAWDVK AVDFDGDGND ELLQATGFVA
GKRWRWPELQ ELAMANDQLL QHPWAWPHFR PGDDISGHQA NVLWTRHGGR YIDIAPQSGL
GHRDVSRGIA IGDVDLDGRP DALVANQWQD SRLVLNRSRS TSQSTLILKR AGEGGRQTTL
ALGASVVARP GDGRPDLRAQ LYPSNGHAGV SSPELFFAVD GITPFVVSWR TAGGVRTAQV
SLGPGRHELV LHDDGQVATR