| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0576 |
|---|
| Symbol | |
|---|
| ID | 5057016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 650976 |
|---|
| End bp | 651596 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640472846 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157435 |
|---|
| Protein GI | 145593138 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.805789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGGCT TGGGGGCGGC CGATCGATAC GGCTTCGCGC TGGCCGGCGG CTACGCGGTG
CAAGCCGCCG GGCTGCTGGA GCGACCCAGT GAGGACCTCG ACCTGTTCAC CGCCTGGGAC
CGCCGCAACG AGTTCACCGC CGCGGTCACC GCCGTCGTGC ACGTCTACCG AGACGACAGC
CTCACCGTCG AGACCAAGCG GCAGTACGAC ACCTTCGCCC GGCTGGCCGT CACCGACGGT
ATCCGGGCTT CCAAGGTCGA ACTCCGTGTG GACTGGCGCG CCAACGAACC GATCCTCATG
GCGATCGGAC CCGTCCCGCA CCCAGACGAC GCGGTAGCGA ACAAGATGAG CGCCCTCTAC
GGGCGAGCGT TCGCCCGGGA CTTCATCGAC CTCGACGCCA CCCTCCGATC CGGCCGCTAC
ACCCACGACG CCCTCCTCGC CCTCGCGCGG CGCGCCGACC GTGGCTTCGA CCCGCGCACT
TTCGCCGACG CACTCGGACA AGCCACCCAG CTCGATCCCG ACGACTTCGC CCAGTACGGC
GTCACCGGAC CAGTGCTGGA CAATCTCCGA GGCCGATTCG CGGAGTGGCG CCGCGAACTG
CTCGACGACG AGAAAGGATA A
|
|---|
| Protein sequence | MPGLGAADRY GFALAGGYAV QAAGLLERPS EDLDLFTAWD RRNEFTAAVT AVVHVYRDDS
LTVETKRQYD TFARLAVTDG IRASKVELRV DWRANEPILM AIGPVPHPDD AVANKMSALY
GRAFARDFID LDATLRSGRY THDALLALAR RADRGFDPRT FADALGQATQ LDPDDFAQYG
VTGPVLDNLR GRFAEWRREL LDDEKG
|
|---|
| |