Gene Strop_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0503 
Symbol 
ID5056942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp582508 
End bp583398 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content73% 
IMG OID640472776 
ProductABC transporter related 
Protein accessionYP_001157366 
Protein GI145593069 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTTC TCGGCCCGAA CGGGGCCGGC AAGACGACGT TGGTCCGCAT CCTGTCGACG 
TTGCAGCCAC CGGACGCCGG AAGCGCCCGG ATCTGCGGCG TCGACGTGGT GGCCGCGCCC
GCCCAGGTCC GGCGCCGGAT CGGCCTCTCC GGTCAGTTCG CCGCAGTCGA CGAGTACCTC
ACCGGTCTGG AGAACCTGAC CATGGTGGGC CGTCTCTACC AGCTCGACTG CCGCACCACG
CGCAGCCGAG CCGAATCGTT GATCCGGCGG CTGGGGCTCG ACAGCGCCGC GGACCACCCG
GCCCGAGGTT ATTCCGGCGG GATGAGTCGA CGCCTCGACC TGGCCTGTGC GCTGATCGGG
CGTCCCGACG TGCTGATCCT GGACGAGCCG ACGACGGGAG TGGACCCGGC CGGCCGCCGG
GCCCTGTGGG ACATCGTCAG AGGGCTCGCC GAGGACGGTG TGACCGCGCT GCTCACCACG
CAGTACCTGG ATGAAGCGGA CCGGCTCGCC GATCGCATCG CGATCCTCGC CGGCGGCCGC
CTGGTGACCG AGGGTACGCC CGAGGATCTC AAGAAACGCC TCGGCGGCGA CCGGTTGGCG
GTGACAGTGG ACCGGCGGGA CGCTGACCGC GCGGCGCGTC TGCTGGCGGC ACACGGCCTG
CGGGAGCCGG ACCGGAGCCC GGACGGGTGC CGGCTCTCCG TGCCGGTGGC CGACGCCACC
GTTGCGATGA TCGGGCTGGC GGGTGACCTC CGTGCGCACG GTGTGGAGCC GCTGGAACTG
GGCACGGAGC GGCCCAGCCT CGACGACGTC TTCCTGGCCC TGACCGCGGC GGAGGAAGGC
GGACACCGAT GCCGACCCTG CGCGGGGCGC TCACCGACAG CGCGATCCTG A
 
Protein sequence
MAVLGPNGAG KTTLVRILST LQPPDAGSAR ICGVDVVAAP AQVRRRIGLS GQFAAVDEYL 
TGLENLTMVG RLYQLDCRTT RSRAESLIRR LGLDSAADHP ARGYSGGMSR RLDLACALIG
RPDVLILDEP TTGVDPAGRR ALWDIVRGLA EDGVTALLTT QYLDEADRLA DRIAILAGGR
LVTEGTPEDL KKRLGGDRLA VTVDRRDADR AARLLAAHGL REPDRSPDGC RLSVPVADAT
VAMIGLAGDL RAHGVEPLEL GTERPSLDDV FLALTAAEEG GHRCRPCAGR SPTARS