Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0495 |
Symbol | |
ID | 5056934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 573774 |
End bp | 574613 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640472768 |
Product | MIP family channel protein |
Protein accession | YP_001157358 |
Protein GI | 145593061 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGC GTGTGAGAGC GCCCGGACTC CTTGGAGAGT TGGCCGCCGA GTTCGCCGGC ACCGCGATCC TGATTCTCTT CGGCGTGGGC GTCGTCGCCC AGGTCAATGC CGGTGGCACC GGTGAGTTCG ACAGCATCGC CTGGGCCTGG GGCCTTGGCG TCGCGCTCGG CATCTACGTC GCTGGCCGGA TCAGTGGCGC CCACCTCAAT CCCGCGGTGA CCCTCGCCCT CGCGGTGTTC AAGGGCTTCT CGTGGCGCAA GGTGATGCCC TATGCCCTCG CACAGACCGC CGGGGCGTTC GTCGCGGCCC TGATCATTCG CTGGAACTAC AGCGAGGTGC TGCAGCGGTT TGACCCGGGC TTGACCAGCA AGAGCCAGGG CGTCTTCTCG ACTCTGCCGG GTGCTGGCAT CACTGAGTGG GGCGCCCTGC GTGACCAGAT CATTGGCACG GCGATCCTGC TGTTTCTGAT CCTTGCCGTA ACCGACGCCC GGAACTCTCT GCCCGGTGCC AACCTTGCCC CGCTGATCGT CGGCCTGATC GTGGTCGCGA TTGGGATGGC GTTCGCCGTC AACGCCGGCT ACGCGATCAA CCCAGCCCGC GACTTCGGCC CCCGCCTCGC GTCCTTCCTC ACCGGGTACG AGACGGCCTT CCTGGACCCG AGCGGATATC CGTACTTTTG GGTGCCCATC GTCGGGCCGC TAGCCGGTGG TGTCATCGGC GCCGGCCTCT ATGAGTTGTT CGTCGGCCGC TTCCTGCCGA GCGATGAGCC GCAGCCGGGC GCGAACGGCA GCGAGACTGC GACCGAGACG GCTGCGGTGT CCGAGCGCGC CCGCCTCTGA
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Protein sequence | MTQRVRAPGL LGELAAEFAG TAILILFGVG VVAQVNAGGT GEFDSIAWAW GLGVALGIYV AGRISGAHLN PAVTLALAVF KGFSWRKVMP YALAQTAGAF VAALIIRWNY SEVLQRFDPG LTSKSQGVFS TLPGAGITEW GALRDQIIGT AILLFLILAV TDARNSLPGA NLAPLIVGLI VVAIGMAFAV NAGYAINPAR DFGPRLASFL TGYETAFLDP SGYPYFWVPI VGPLAGGVIG AGLYELFVGR FLPSDEPQPG ANGSETATET AAVSERARL
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