Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0493 |
Symbol | |
ID | 5056932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 570421 |
End bp | 572145 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472766 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001157356 |
Protein GI | 145593059 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCCG CGACACTGTC ACTGGCCACC CGCGAGCGGT CCCTGGCCGC ACTGAGCAGC GGCCTGGAAC TGGACGTCCT GGTGATCGGC GGCGGCGTCA CCGGCGCCGG CTGCGCCCTT GACGCCGTCA CTCGGGGCCT GTCGGTCGGC CTCGTCGAGG CCCGCGACTG GGCCAGCGGC ACATCGAGCC GTTCCAGTAA GCTCATCCAC GGCGGTCTGC GCTACCTGGA GATGCTCGAC TTCGGGCTGG TCCGCGAGGC GCTGCGCGAG CGGGGCCTCC TCCTGCAGCG ACTCGCCCCG CACCTGGTCC GGCCGGTGCC GTTTCTCTAC CCGCTGCGAC ACCGCGGCTG GGAACGACTG TACGCGGGCG CCGGCGTCCT GCTCTACGAC ACGATGAGCT ATTCCGGCAG CAATTCCCGC GGGGTACCGG CCCACCGGCA CCTGACCCGA CGTGGCGCGG TACGCGCTTG CCCGTCCCTG CGTCCGGAGT CGCTGGTCGG CGCCTTGCAG TACTACGATG CCCAGGTCGA TGACGCCCGG CTGGTGACGT GTCTTGTCCG TACCGCCGCA GCCCACGGCG CGTATCCCGT TTCCCGAGCC CGGGTCGTGG GCCTCCTGCG TGACGGCCAC CGCGTCACCG GCGCGCGGGT CCACGACCTG GAGACCGACC AGGTCTTCGA GATCCGTGCC CGGCAGGTCA TTAACGCCAC CGGAGTCTGG ACCGACGATA TCCAGTCTCT CGTTGATGAG CCTGGGCCGG TGCAGGTTCG GGCTTCGAAG GGTATTCACC TCGTCGTACC CCGCGACCGG ATCCACTCCA CCACCGGCCT GATCCTGCGA ACCGAATCCA GCGTGCTGTT CGTGATCCCG TGGGGTCGGC ACTGGCTGAT CGGCACCACC GACAGCGACT GGGATCTGGA CAAGGCGCAC CCGGCAGCGA CCAGCCGCGA CATCGACTAC CTGCTGGAAC GGGTCAACGA GGTACTGGCC ACTCCGCTGA CCCGCGACGA CGTCGAGGGC GTGTACGCGG GTCTGCGCCC GCTGCTGTCC GGGCAGTCGG ATGCGACTGC CAAGTTGTCC CGTGAGCACA CGGTGGCCAG TTCGATGCCG GGTCTGGTGA TGGTCGCCGG CGGGAAGTAC ACAACGTATC GGGTGATGGC CCGGGACGCT GTCGATGAGG CCGTGCGGGG ACTCGGTGGT GGGGTGCCGC GGTCCTGCAC CGACCAGGTT CCCCTGCACG GCGCCGAGGG CTATGTCGCC CGATGGAACC AGCGCCGTCG CATCGCGCGA CAGTACGGCC TGACCGTGGA GCGGGTCGAG CATCTCCTGC GTCGCTACGG GGCCGCCGTC GACGAGGTGC TGCACCTGCT CCGAGAGGAT CCGACCCTCG TCGAGCCGCT CGACGGCACC GACGACTATC TGCGTGTGGA GGTCGTTCAC GCGGTGTCGG CCGAGGGCGC CCTGCACCTG GAGGACGTAC TCACCCGGCG TACACACGTC TCGATTGAGA CGTTCGACCG GGGCCTGGCA GCGGCCCGCC CGGCAGCGCA GTTGATGGCA CCGGTGCTCG GCTGGGACGC CGAGCGTACG GACCGCGAGG TGGCGCACTA TGTCGCGCAG GTGGACGCCG AACGGATTGC GCACGACCAG ATTGACGACC AGGCCGCCGA CGCGGCCCGG CTGGTCGTGC CGGATGTGGT GCCGCAGGTA GCACTCGCGG CCTGA
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Protein sequence | MHSATLSLAT RERSLAALSS GLELDVLVIG GGVTGAGCAL DAVTRGLSVG LVEARDWASG TSSRSSKLIH GGLRYLEMLD FGLVREALRE RGLLLQRLAP HLVRPVPFLY PLRHRGWERL YAGAGVLLYD TMSYSGSNSR GVPAHRHLTR RGAVRACPSL RPESLVGALQ YYDAQVDDAR LVTCLVRTAA AHGAYPVSRA RVVGLLRDGH RVTGARVHDL ETDQVFEIRA RQVINATGVW TDDIQSLVDE PGPVQVRASK GIHLVVPRDR IHSTTGLILR TESSVLFVIP WGRHWLIGTT DSDWDLDKAH PAATSRDIDY LLERVNEVLA TPLTRDDVEG VYAGLRPLLS GQSDATAKLS REHTVASSMP GLVMVAGGKY TTYRVMARDA VDEAVRGLGG GVPRSCTDQV PLHGAEGYVA RWNQRRRIAR QYGLTVERVE HLLRRYGAAV DEVLHLLRED PTLVEPLDGT DDYLRVEVVH AVSAEGALHL EDVLTRRTHV SIETFDRGLA AARPAAQLMA PVLGWDAERT DREVAHYVAQ VDAERIAHDQ IDDQAADAAR LVVPDVVPQV ALAA
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