Gene Strop_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0423 
Symbol 
ID5056862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp483343 
End bp484449 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content70% 
IMG OID640472696 
Productcitrate synthase 2 
Protein accessionYP_001157286 
Protein GI145592989 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.523327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACT TCAAACCGGG ACTGGAGGGC GTCATCGCCT TCGAGACCGA GATCGCCGAA 
CCCGACCGGG AGGGTGGCTC GCTGCGTTAT CGCGGCGTGG ACATCGAAGA TCTCATTGGT
CAGGTCTCGT TCGGCAACGT CTGGGCCCTG TTGGTGGATG GACGGTTCGG CCCGGGCCTG
CCGCCTGCCG AGCCGTTCCC GGTCCCGGTG CACTCTGGTG ACATCCGGGT GGACGTTCAG
TCCGCGGTGG CGATGCTCGC CCCGTACTGG GGTCTGCACC AGTTGCTCGA CATCTCCGAC
GAGCAGGCCC GCGAGGACCT GGCCCGGGTG TCGGTGACCG CGCTCTCCTT CGTCGCCCAG
TCCGCGCGGG GCCTGGGCCT GCCGGCGGTA CCGCAGAAGG AGATCGACAA GGCCTCCACC
ATCGTCGAGC GCTTCATGAA GCGCTGGCGA GGCGAACCGG ACCCGCGGCA CGTCAAGGCC
GTGGACGCCT ACTTCATCTC GGCCGCCGAG CACGGCCTGA ACGCCTCCAC CTTCACGGCC
CGCATTGTCG CCTCCACCGG CGCGGATGCG GCGGCCTGCA TCTCCTCCGG CATCGGTGCG
CTCTCCGGGC CGTTGCACGG CGGTGCGCCC TCCCGGGTGC TGAACATGCT CGAGGCGGTA
GAACGCAGTG GTGACGCGGA GGGGTACGTC CGGGGCGTAC TCGACCGCGG TGAGCGGCTG
ATGGGCTTCG GTCATCGGGT CTACCGGGCC GAGGACCCGC GGGCCCGGGT GCTCCGCCGC
ACGGCCAAGG AGTTGGGTGC CCCGCGCTTC GAGGTCGCCG AGGCCCTGGA GAAGGCCGCC
CTGGCAGAGC TGCACAGCCG CAAGCCGGAC CGGGTTCTCG CCACCAACGT CGAGTTCTGG
TCCGCGGTCG TGCTGGACTT CGCCGAGGTG CCCGCCCACA TGTTCACCTC GATGTTCACC
TGCGCCCGAA TGGGCGGCTG GAGCGCCCAC ATCCTGGAAC AGAAGAAGCT CCAGCGGCTC
GTCCGCCCGT CCGCCCGATA CGTCGGGCCC GGCTCCCGCC GGCCGCACGA GGTCGAGGGC
TGGGACCAGG TGCCGCACGG CGTCTGA
 
Protein sequence
MADFKPGLEG VIAFETEIAE PDREGGSLRY RGVDIEDLIG QVSFGNVWAL LVDGRFGPGL 
PPAEPFPVPV HSGDIRVDVQ SAVAMLAPYW GLHQLLDISD EQAREDLARV SVTALSFVAQ
SARGLGLPAV PQKEIDKAST IVERFMKRWR GEPDPRHVKA VDAYFISAAE HGLNASTFTA
RIVASTGADA AACISSGIGA LSGPLHGGAP SRVLNMLEAV ERSGDAEGYV RGVLDRGERL
MGFGHRVYRA EDPRARVLRR TAKELGAPRF EVAEALEKAA LAELHSRKPD RVLATNVEFW
SAVVLDFAEV PAHMFTSMFT CARMGGWSAH ILEQKKLQRL VRPSARYVGP GSRRPHEVEG
WDQVPHGV