Gene Strop_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0417 
Symbol 
ID5056856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp477762 
End bp478196 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content69% 
IMG OID640472690 
ProductMarR family transcriptional regulator 
Protein accessionYP_001157280 
Protein GI145592983 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.644689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGA AGAGCGTGCC ACCGGTGCAG TTGGCGGTCC AGCTGCGTGA TGCGATTACC 
CGACTCAACC GGCGGGTCCG CCAGGCCAGA CCGGTTGGTG ACCTGACGGT CACCCAGCTC
TCCGCGCTCA CCAGCCTCCG GCTGGCGGGC GCGCTGACGC CCCGGGAACT CGCCGACGTC
GAACGGGTTC AGCCGCCGAC GATGACCAAG ATCGTCGCGA AACTGGAGGA GCGCGGCCTC
GTGCAGCGAA CCCCTCATCC GACCGATGGA CGGCAGGTGA TCCTCGCGGC GACGGAGGGG
GGTGGAGCGG TGCTGGACCA GTTTGAGCGG GTTCGGGATC AGTGGCTGGC CCACCGGCTG
GCCGAACTGA GTGCGGAGGA GCGGGAGACG CTGCGCCAGG CGGCAGAGAT CCTGCAACAG
CTCACCCGTA CCTGA
 
Protein sequence
MTAKSVPPVQ LAVQLRDAIT RLNRRVRQAR PVGDLTVTQL SALTSLRLAG ALTPRELADV 
ERVQPPTMTK IVAKLEERGL VQRTPHPTDG RQVILAATEG GGAVLDQFER VRDQWLAHRL
AELSAEERET LRQAAEILQQ LTRT