| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0379 |
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| Symbol | |
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| ID | 5056817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 436657 |
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| End bp | 438522 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640472651 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001157242 |
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| Protein GI | 145592945 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCACCG ACCGACGTTC GATCTCGATC TGGTCCCAAT CGATCTGGTC CAACGATCGA
TTAGTTCCCG TTTCGATCTG GTCGCAGCCG GCCCACGACG CGCGTGCGGC CCGGTCCGGC
TCGGCGATTC GCTGCCCGAC CGTGTGGCCC GCGCCACACC GTCCGCGCCT CGAGGACTCA
ACGGGGCGCA CCCACGAGAG GGCACCCCCC ATCGAGATGA GCGAACTCAC CCACAACCTC
ATGGACGGCA CCGAACTTGC CGCCACCGCA CCGGTACGCC CGGAAGCACC CACCTTCGCC
GAGTTGGGCG CCCGTAAGGA GACCGTTGAC GCGCTGAACG CCGCCGGCAT CACCCGGGCC
TTCGCCATCC AGGAGTACGC GCTACCGATC GCGCTGCGCG GCGTTGACCT GATCGGCCAG
GCTCCGACCG GCACCGGCAA GACCCTCGGC TTCGGCGTAC CACTGCTGGA GCGGGTCTTC
GCTCCCGCCG AGGGCGGCGA CGGCACCCCA CAGGCGCTGG TCGTCGTACC AACCCGCGAG
CTGGGCATCC AGGTCGCCAA GGACCTCCAT GCCGCGGGAA GCACCCGTGG CGTCCGGGTA
CTGCCGATCT ACGGCGGGGT GGCGTATGAG CCGCAGATCG AGGCGCTCCG CACGGGCGTG
GAGATCCTGG TCGGCACCCC CGGCCGGCTG CTCGACCTGG CCAAGCAGAA GCAGCTGAAG
CTGGATCGAG TCCGCGCGCT TGTCCTGGAC GAGGCCGACC GGATGCTCGA CCTGGGTTTC
CTCGACGATG TCGAGAAGAT CCTGGCGATG CTGCCGGAAG AGCGACAGAC GATGCTCTTC
TCGGCCACGA TGCCGGACCC GATCGTCGCG CTGTCCCGGC GCTTCCTACG CCGGCCGGTG
ACAATCCACG CCGGGCACAC CGCCGAGACC GGCCCGTCAC CGCAGACCCA GCAGCTGGCC
TACCGCACCC ACTCCCTCAA CAAGATCGAG ATTGTGGCGC GGATCCTCCA GGCCAAGGGG
CGCGGGCTGA CCATGATTTT CACCCGAACC AAGCGAGCGG CCGACCGGGT GGCGGCGGAT
CTGGACTTCC GCGGCTTCGC CGTGGCCGCC GTCCACGGCG ACCTCGGCCA GGGCGCCCGG
GAGCGGGCGC TGCGGGCCTT CCGCACCGGC AAGATCGACA CTCTGGTCGC GACCGACGTT
GCCGCCCGGG GCATTGATGT CAGCGGCGTC ACCCACGTCC TCAACTACGA CTGCCCGGAG
GACCAGGACA CCTACACCCA CCGGATCGGC CGGACCGGCC GAGCGGGGGC GAGCGGCGTC
GCGGTGACCT TCGTCGACTG GGACGACATG CCCCGCTGGC GAATCATCGA CAAGACCCTC
GGCCTGGAGA TGCCGGAACC GCCGGAGACC TACCACACCT CCCCGCACCT CTATGCCGAA
CTGGACATCC CCTCGGAGGT CACCGGCACT CTGCCCACCG ACGCGCGAAC CCGGGCCGGG
CTCTCCGCCG AGGTCGAGGA GGACCTCGGC GGAGGGTCCC GCCGTGGCGA CGGCCGCGGG
CCGCGCCGTG GCACGGGCCG GGACCGCCGC CGGGGACGCG GCGGCGACGC CAGTGGTGGC
GCGGGCTCCT CCACGACCGA GCCGGGCGAG GCCGGCGAGA CCGCGGAGCG CACCCCCCGC
CGGCGGCGAC GCCGGCGGGG CGGCGAGGTC GTCACCACCG GCGAGCCCGC GGTAGTGACC
GTCGAGACCG GCGCGGCGGC CACCACCGAC TCGCCGGGTG CCGACGCGCC AAAGCCACGG
CGGCGCCGTC GGCGCCGTGG CGGTGCTTCC GGCACCGGCA CGGCGGCCAA GACGACCACC
GACTGA
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| Protein sequence | MGTDRRSISI WSQSIWSNDR LVPVSIWSQP AHDARAARSG SAIRCPTVWP APHRPRLEDS
TGRTHERAPP IEMSELTHNL MDGTELAATA PVRPEAPTFA ELGARKETVD ALNAAGITRA
FAIQEYALPI ALRGVDLIGQ APTGTGKTLG FGVPLLERVF APAEGGDGTP QALVVVPTRE
LGIQVAKDLH AAGSTRGVRV LPIYGGVAYE PQIEALRTGV EILVGTPGRL LDLAKQKQLK
LDRVRALVLD EADRMLDLGF LDDVEKILAM LPEERQTMLF SATMPDPIVA LSRRFLRRPV
TIHAGHTAET GPSPQTQQLA YRTHSLNKIE IVARILQAKG RGLTMIFTRT KRAADRVAAD
LDFRGFAVAA VHGDLGQGAR ERALRAFRTG KIDTLVATDV AARGIDVSGV THVLNYDCPE
DQDTYTHRIG RTGRAGASGV AVTFVDWDDM PRWRIIDKTL GLEMPEPPET YHTSPHLYAE
LDIPSEVTGT LPTDARTRAG LSAEVEEDLG GGSRRGDGRG PRRGTGRDRR RGRGGDASGG
AGSSTTEPGE AGETAERTPR RRRRRRGGEV VTTGEPAVVT VETGAAATTD SPGADAPKPR
RRRRRRGGAS GTGTAAKTTT D
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