Gene Strop_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0378 
Symbol 
ID5056816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp435350 
End bp436555 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content72% 
IMG OID640472650 
Producthypothetical protein 
Protein accessionYP_001157241 
Protein GI145592944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAC CCCTGCCCGC CGCGCTCGCC GAGGTGCGGG CACTGCTGCT CGACGCCGGG 
CTCAACCGGG CGGTGGCCGC CGGGCATCGC CGTGGGCTCC GCCCAGCGGC GCACCGTGCG
GAGCTACGGC CGGTCACCCT CAAATCCGGC CCCCGCCTCC AGGTCATCAC CACGGACGGG
AGCGCGCCTC ACACCCGCAA CCTCGCCCGA GGCGCGGAAG CAGAGGCGGC GGTGGACGCG
CTGCTGGCCG AACCCTTCGG CAACTGGCAC GTCGAGACCG CAGCGACGAC CCTGCAGCTC
CGAGTCACAA AGTCCGGCGC GGCACAGGTA CACCGCATGG CGGCTCCGCC GGTAGCCGAG
CCGGTCGGCC ACGACCGGAC GAAGGCCCAC CTGCTCGATC CCGGTGACCC GATCTTCACC
GTGATCGGCG GGTCGGCGGC CAAGCGGCGG CAGGTGGACG CGTTTCTGCG GGCGCTCGCC
GCGACGCTCC CGGACGGGCT CCGCGGTCCA CTGCGCGTGG TTGACCTGGG CTGTGGGAAC
GCGTACCTGA CTTTCGCCGC GTACCGCTGG TTGACCCAAC AGGACATCGA CGTCCACCTG
GTCGGCGTCG ATGTCCGCGA AGACCAGCGC CAACGCAACA CCGAGCTGGC TCGGCGGTTG
GGTTGGGCCG ATCAGGTGCG TTTCGTGGCG GGAACGATCG CCGACGCGGC CGTCGGGCCC
GACCCCGACC TGGTGCTGGC TCTGCACGCC TGTGACACCG CCACCGACGA GGCGCTCGCA
CGGGCTGTAC GGTGGGGGTC TCGCTGGGTA CTCGCGGCTC CCTGTTGCCA CCATGACCTC
GCCGCGCAGC TCCGCTCCCA GCCCACCCCA CCCCCGTACG AGCTGCTGAC TCGGCAGGGC
ATCCTCCGCG AGCGGTTCGC CGACGTGCTC ACCGACGCGG TCCGGGCCGG ACTGTTACGG
CTGCACGGCT ACCGGGCCGA GGTGGTCGAG TTCGTCGACT CCCGCCACAC GCCGCGCAAC
CTGCTCATCC GGGCCCGCCG CGCCGGGGCA CCCCCGACTG GTGAGCACTG GGCGCAGTAC
CGGACCCTGG TCGACGGTTG GCGGGTCACG CCGAGGCTGG CGACACTGCT CGGCGAGCCA
GCCGGTGGGA CGGCAACCAG TGCGACCAAC GGCCCGGCGG ACACCACCAC AGACCCGACC
GACTAA
 
Protein sequence
MPEPLPAALA EVRALLLDAG LNRAVAAGHR RGLRPAAHRA ELRPVTLKSG PRLQVITTDG 
SAPHTRNLAR GAEAEAAVDA LLAEPFGNWH VETAATTLQL RVTKSGAAQV HRMAAPPVAE
PVGHDRTKAH LLDPGDPIFT VIGGSAAKRR QVDAFLRALA ATLPDGLRGP LRVVDLGCGN
AYLTFAAYRW LTQQDIDVHL VGVDVREDQR QRNTELARRL GWADQVRFVA GTIADAAVGP
DPDLVLALHA CDTATDEALA RAVRWGSRWV LAAPCCHHDL AAQLRSQPTP PPYELLTRQG
ILRERFADVL TDAVRAGLLR LHGYRAEVVE FVDSRHTPRN LLIRARRAGA PPTGEHWAQY
RTLVDGWRVT PRLATLLGEP AGGTATSATN GPADTTTDPT D