Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0326 |
Symbol | |
ID | 5056764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 377341 |
End bp | 378741 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640472598 |
Product | Beta-glucosidase |
Protein accession | YP_001157189 |
Protein GI | 145592892 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
TIGRFAM ID | [TIGR03356] beta-galactosidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCACGC TTCGTTTTCC GGAGAACTTC CGCTGGGGCA CGGCCACAGC TGCCTACCAG ATCGAGGGCG CGGCCCACGA AGACGGCCGG GGGCCGTCGA TCTGGGACAC CTTCAGCCGT ACGCCGGGCA AGGTCTACCA GGGTCACACC GGTGACGTCG CCTGCGACCA CTACCACCGG TACGCCGACG ACGTGGAGCT GATGGCAGGG CTGGGGATCC AGACGTACCG GTTCTCGGTG TCCTGGCCCC GGGTCCAGCC GGACGGCACC GGCCCGGTCA ACCCGCGCGG GCTGGACTTC TACGACCGAT TGGTGAACGC CCTGCTGGCC CGGGGGATCG ACCCGATGGT CACCCTCTAC CACTGGGACC TACCGCAGAC CCTGCAGGAT CGAGGCGGTT GGGCTGCCCG GGAGACCGCG GAGCACTTCG CCGGGTACGG CGCCGCCGTC CACGGTCGGC TCGGAGACCG GGTGAAATCC TGGACCACAC TCAACGAACC GTGGTGCTCG GCGTACCTGG GCTACGGCAA CGGGGTACAC GCCCCCGGGG TCGCGGACCC GGGAGCCGCC TTCACCGCCG TGCACCACCT GCTGCTCGGG CACGGCCTGG CGGCCCGGGC GCTGCACGCG GCCGGCGCGG GGAGCGTCGG GATCACGCTC AACCCGGCCG ATGTCCGCCC CGCCGACCCG GACAGCGCCG CCGATGCCGC CGCCGTACGC CTGGTTGACC GGCTTCACAA TCGGATCTTC TTGGACCCGC TGTTCCGGGC CGCGTACCCG GCGGATGTGC TGGAGCACGT CGCCCGATTC GTGCCGCCGA CGTTCATCCG GGACGGCGAC GAGAACGTGA TCGCCACCCC GATCGACCTG CTTGGCGTCA ACTACTACGC CCCCCTCTAC GTCGCAGGTA AGCCGGACGG TGCCGGCGGC GGTGGGGCGT TTCCGGGCAC CGACGGGGCG GTGGAGTTCC TGTCACCCGC CGGACCGCTG ACCGATATGG GCTGGATGAT CGAGCCGGCC GGGCTCACCC GGCTGCTGGA ACGCCTCGCC ACCGACTACC CGGGCGTGCC GTTGATGATC ACTGAAAACG GGGCGGCCTT CCCGGACCGC GCCGCGCCTC CGGCCAGCCT TGACCAACCG GAGGCGGACG GAGTCAGCGG GGTGGTGGAC ACCGACCGGA TCGCCTACCT CGACGGGCAC CTACGCGCTG CGCACGAGGC CATCGCCCGC GGGGTGGACC TACGCGGCTA TCTCGTATGG TCGTTGCTGG ACAACTTCGA GTGGGCCGAG GGCTATCGGA AACGGTTCGG GATCGTCCAC GTCGACTACC TGACCCAGCG ACGCTCACCG AAGGCGAGTG CCCGCTGGTA CCAGGAGGTG ATCTCCCGGC ACGGGCTCTG A
|
Protein sequence | MSTLRFPENF RWGTATAAYQ IEGAAHEDGR GPSIWDTFSR TPGKVYQGHT GDVACDHYHR YADDVELMAG LGIQTYRFSV SWPRVQPDGT GPVNPRGLDF YDRLVNALLA RGIDPMVTLY HWDLPQTLQD RGGWAARETA EHFAGYGAAV HGRLGDRVKS WTTLNEPWCS AYLGYGNGVH APGVADPGAA FTAVHHLLLG HGLAARALHA AGAGSVGITL NPADVRPADP DSAADAAAVR LVDRLHNRIF LDPLFRAAYP ADVLEHVARF VPPTFIRDGD ENVIATPIDL LGVNYYAPLY VAGKPDGAGG GGAFPGTDGA VEFLSPAGPL TDMGWMIEPA GLTRLLERLA TDYPGVPLMI TENGAAFPDR AAPPASLDQP EADGVSGVVD TDRIAYLDGH LRAAHEAIAR GVDLRGYLVW SLLDNFEWAE GYRKRFGIVH VDYLTQRRSP KASARWYQEV ISRHGL
|
| |