Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0274 |
Symbol | |
ID | 5056712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 315328 |
End bp | 316527 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640472546 |
Product | membrane protein-like protein |
Protein accession | YP_001157137 |
Protein GI | 145592840 |
COG category | [S] Function unknown |
COG ID | [COG4129] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.024335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCG ACGGCGCCCG GATCGCGGCG ACGGTGCAGC GGCTGCGCCA TCGTGGTCAC GCGACTCTCC AGGACCGTTT GCACCGGGTC CGCGCGACGT TGGTGCTCTC CGTCCAGGCC GGACTCGCCG CCGGCATCTC CTGGCTGGTG GCGCATGAGC TGCTGGGCAG CCCCCAGCCC GTCTTCGCGC CGATCTCGGC GGTCGGTACC CTCGCGGTCT CGGTCGGCCA GCGCTTCCGC CGGACCGTGG AGCTGATCGT CGGGGTGGCG GTCGGCGTGG CGGTCGGCGA CCTTTTGATC TTTTTGCTGG GCACCGGGCC GTGGCAGCTC TCTCTCGTGG TGACCTCGGC GATTCTGCTG ACCGTCTTTG CCGGCGGGAG CGTCGCGATC CTGATTCAGG CGGCGGCGAC GGCTGTCCTG ATCGTCACGC TCAGCCCGGC CGGGCACAAC CTGGAGATAC CGCGATTCCT CGACGCGTTG ATCGGCGGTA GCGCCGCGCT ACTGGTGACC GCGCTGCTGT TACCGCTGAA CCCGGTACGG GTGCTCAACC GGGCCGCTCG TCCGGCGTTG GATCTGCTCG CCGACCAGCT CGACGAGGCC GCCGACGGGC TGCGAGAACG GGAACGGGAC AAGGTGCAAC ACTCGCTGGA GCAGCTCCGC GATCACAAGG AGGAAGTGGC GTCGTTCGAC GAGGCGATCC AGGGCGCCAA GGAAACCGCC ACGCTGTCTC CCGCGCGTTG GCACCGCCGG AACGAGCTGA CCCACTACGC GGAGGCGGCC GATCCGATCG AACGGGCGAT TCGAAACGCC AGCACACTAA TCCGGCGTGC CATCACCCTG ATCGAGGACG CGGAGCCGAT CCCCGAGCCG ATGCCGGCCT CGATGGGCCA CCTCGCCGAG TCGGTACGGT TGCTGCGGCA CGAGTTCGCC GTCGGCGAGG AGCCGGAGCG GGCCCGCGAG CGGTCGCTGC GCGCGGTCAG CGAGGCCGCG CAGGCGTACA CCGAGGGCGT GGGCTTCTCC GGCAGCGTGG TGGTCGCCCA GGTGCGTACC ATCGCCAGCG ACCTGCTGGT CGCCTCAGGT GTCTCCCAGG AGGAGGCGAA CCGCCTGGTC CGCGAGGCCT TCGGCGACCT GAAGCAGAAG AAGCACGTGG AATCGGAGCA GCCCGAACGG AAGTCGGAGC CCCCGTCCAA CGGTGGCTGA
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Protein sequence | MDIDGARIAA TVQRLRHRGH ATLQDRLHRV RATLVLSVQA GLAAGISWLV AHELLGSPQP VFAPISAVGT LAVSVGQRFR RTVELIVGVA VGVAVGDLLI FLLGTGPWQL SLVVTSAILL TVFAGGSVAI LIQAAATAVL IVTLSPAGHN LEIPRFLDAL IGGSAALLVT ALLLPLNPVR VLNRAARPAL DLLADQLDEA ADGLRERERD KVQHSLEQLR DHKEEVASFD EAIQGAKETA TLSPARWHRR NELTHYAEAA DPIERAIRNA STLIRRAITL IEDAEPIPEP MPASMGHLAE SVRLLRHEFA VGEEPERARE RSLRAVSEAA QAYTEGVGFS GSVVVAQVRT IASDLLVASG VSQEEANRLV REAFGDLKQK KHVESEQPER KSEPPSNGG
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