| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0244 |
|---|
| Symbol | |
|---|
| ID | 5056682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 278504 |
|---|
| End bp | 279769 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640472516 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157107 |
|---|
| Protein GI | 145592810 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0527558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.511297 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAACC ACGCGGGGAG GCGTTCCGGC GGGGGAGGGC GCAAACTGGG GAGCGTGCGG
ATCACCTCGG CTCTCGTTGA CCCGGCGCTG CTTGATCTTC CCTGGTCGAC TCCGCTGGTG
GAGTGGCCGG CGCAGCACCT GGTGGCGCTG CCGCAGGGCA TCTCTCGACA TGTCGTCCGG
TTCGTCCGAC TCGGCGGGTA CGTGTACGCC GTCAAGGAGA CCGGCGAGCG GGTGGCCGAG
CGGGAGTACG ACCTGCTGCG GGCCCTGGAG CGAATCGACT TCCCGACGGT GGAGGCGGTG
GCGATCGTCG CCGACCGGCA GACCGAAGCC GGTGAACCGT TGGACCCGGT GTTGATCACC
CGGCACCTCC AGTTCTCCCT GCCCTATCGG GCGCTCTTCT CGCACACGCT GCGACCGGAG
ACGATGCAGC GGCTCCTCGA CGCGTTGGCC GCGTTGCTGG TACGGATGCA CCTGACCGGC
TTCTTCTGGG GCGACTGCTC GTTGTCGAAC ACGCTCTTCC GCCGGGACGC GGGTGCGTTC
GCGGCCTACC TGGTGGACGC GGAGACCGGC GTGCTGCACC GTTCGTTGTC GAACGGGCAG
CGCGGCGAGG ACCTGGAGAT CGCCCGGGTG AACATCTTCG GCGAGGCGTT GGATCTACAG
GCGGCCGGGC TGCTCCACGA GTCGATCGAT CCAGCGGTGG TGTGCGAGGA GGTCGTGCAG
CGGTACGAGC GGCTGTGGCA TGAGATCACC TACGAACAGC AGATCGAGCG GGAGGCTCGG
CACGACATCG AGGGCCGGAT CCGTGCGCTC AACGAGCTTG GCTTCGACGT GGCCGAGATC
GCCGTGTCGA CGATCGACGA CGGGCGGTAT CTGGTTCGGC CGAAGGTGGT TGACGCCGGC
TACCACACGC GTCGCCTGCT GCGCCTGACG GGTCTGGACG CGGAGGAGAA CCAGGCTCGT
CGGCTCCTCA ATGATCTGGA CGCCTACCGA GCCGAGAGCG ACCTGATCGA TGAGCAGCAG
GCGGCACACC GCTGGCTGAC CGAGGTTTTC GAGCCGGTGG TCCGCGCCGT GCCGGCACAT
CTGCGCCGCA AGCTGGAACC GCAGGAGATC TTCGCCCAGA TCATCGAGCA CAAGTGGCTG
CTCTCCCAGC GGGCCGGCCG GGATGTTGGC ATGGCCCCGG CGGTCCAGTC GTACCTCGGG
GACGTGCTGG TGCACCGCCC CGACGAGCAG GCTGTGCTCG GGGTGGAGAT TCCGCCCGCG
GGCTGA
|
|---|
| Protein sequence | MPNHAGRRSG GGGRKLGSVR ITSALVDPAL LDLPWSTPLV EWPAQHLVAL PQGISRHVVR
FVRLGGYVYA VKETGERVAE REYDLLRALE RIDFPTVEAV AIVADRQTEA GEPLDPVLIT
RHLQFSLPYR ALFSHTLRPE TMQRLLDALA ALLVRMHLTG FFWGDCSLSN TLFRRDAGAF
AAYLVDAETG VLHRSLSNGQ RGEDLEIARV NIFGEALDLQ AAGLLHESID PAVVCEEVVQ
RYERLWHEIT YEQQIEREAR HDIEGRIRAL NELGFDVAEI AVSTIDDGRY LVRPKVVDAG
YHTRRLLRLT GLDAEENQAR RLLNDLDAYR AESDLIDEQQ AAHRWLTEVF EPVVRAVPAH
LRRKLEPQEI FAQIIEHKWL LSQRAGRDVG MAPAVQSYLG DVLVHRPDEQ AVLGVEIPPA
G
|
|---|
| |