| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0230 |
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| Symbol | |
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| ID | 5056668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 263470 |
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| End bp | 265695 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640472502 |
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| Product | RecD/TraA family helicase |
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| Protein accession | YP_001157093 |
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| Protein GI | 145592796 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0523048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACG TGACCGCTGC CCCCCGTCCC GCGCTGGCGA CGCTCGACGC GGTTCTAGAG
CGACTTACGT ACGTCAACGA GGAATCCGGC TACACCGTCG CCCGGGTCGC CACCGACCGC
GGTAGTGATC TGTTGACGGT GGTGGGTGCG CTGCTGGGCG CGCAGCCAGG GGAGAGCCTG
CGGCTGCACG GGCGCTGGTC CTCGCACCCC AAGTACGGTC GGCAGTTCGA GGTCGACTCG
TACACCACGG TCCTGCCGGC CACGATCCAG GGCATCCAGC GCTACCTCGG CTCGGGCCTG
GTGAAGGGCA TCGGGCCGGT TTTCGCCGAG CGGATCGTCG CCCATTTCGG CCTGGAGACG
CTGCGGATCA TCGAGGAGGA GCCGGCCCGC CTGGTGGAGG TGCCGGGGTT GGGCCCGAAA
CGCACCGCGA AGATCACCGC GGCGTGGGAG GAACAGCAGG CGATCAAGGA GGTCATGGTC
TTCCTCCAGG GGGTCGGCGT CTCGACCTCC CTCGCGGTAC GGATCTACAA GCAGTACGGC
GACACCTCCA CCGACGTGGT CACGAAGGAG CCGTACCGGC TGGCAGCCGA TGTGTGGGGA
ATCGGCTTCA AGACCGCCGA CACCATCGCC CAGTCGGTCG GTATTCCGCA CGACAGCCCG
CAGCGGGTCA TGGCTGGCTT GCAGTACACG CTCTCCGAGG CCACCGACAA CGGCCACTGC
TACCTACCCG AACCGGAGCT GATAGCGGAC GCCACGAAAA TCCTCGATGT GCCGGCCGAC
CTCGTCACCC GCTGCCTGGA TGACCTGGTC GCCGAGGAGG GCGTCGTCCG GGAGTCGCTA
CCGGGCGGCG ACGCGGAGCC GGTGCGGGCG GTGTATCTGG TGCCGTTCCA CCGGGCGGAG
CGGTCTCTGG CCACCAGCCT GCTCCGCCTG CTCGACGATG GGACCGATCG GTTGCCTCAC
TTCGCGGGCG TCGACTGGGC CAAGGCCCTG ACCTGGCTGA AGGCGCGTAC CGGCAACGAC
CTCGCCCCCG AGCAGGAGCA GGCGGTTCGG CTCGCGCTGA CCTCGAAGGT CGCGGTGCTG
ACCGGTGGGC CGGGGTGCGG CAAGAGCTTC ACCGTCCGTT CGATCGTCGA ACTGGCGGCT
GCCAAGAGAG CCAAGGTCAC CCTGGTGGCC CCGACCGGGC GGGCCGCCAA GCGTCTCTCC
GAGCTGACCG GGCACCCCGC CGCCACGGTG CATCGCCTGT TGCAGCTACG CCCGGGCGGG
GACGCCTCCT ACGACCGGGA CAACCCCCTC GACGTTGACC TGCTCGTCGT GGACGAAGCC
TCCATGCTCG ACCTCATCCT GGCCAACAAG CTCGTCAAGG CCGTCCCACC CGGCGCGCAC
CTGCTGCTGG TCGGCGATGT CGACCAGCTC CCCTCCGTCG GTGCCGGTGA GGTGTTGCGC
GATCTACTCG CCGCTCCAGC CATCCCGCGG GTGCGGTTGA CCCAGATCTT CCGCCAGGCC
GCCCAGTCCG GCGTCGTCAC CAACGCCCAC CGCATCAACG CCGGCCGCCC GCCCCTGCTC
CAGGGCCTGC CGGATTTCTT CCTCTTCGCC TGCGACGACA CGGAGGCCAC CGCCGAGCGC
ACCGTCGATG TCGCCTGTTC CCGCATCCCG GCCAAGTTCC GCCTCGACCC CCGCCGGGAC
GTACAGGTCC TCACCCCCAT GCACCGCGGC CCCGCCGGCT CGGGGGCGTT GAACACCCTG
CTCCAGCAAC GGCTCACCCC GCATCGGGAG GGGCAGCCGG AGCGGCGAGC CGGCGGGCGG
GTGTTCCGCA TCGGCGACAA AGTCACCCAG ATTCGCAACA ACTACGACAA GGGCGAGGCG
GGCGTCTTCA ACGGCACTCT CGGCATCGTC ACCCAGCTCT CGACCGAGGA GCAGACGCTG
ACGGTCCGCA CCGACGAGGA CGAGAGCATC GACTACGACT TCGACGAACT CGACGAGCTG
GCCCACGCCT ACGCCATGAC CATCCACCGC TCGCAGGGCT CGGAATACCC GGCGGTCGTC
ATCCCGCTGA CCACCAGCGC CTGGATGATG CTGCAACGCA ACCTGCTCTA CACCGCCGTC
ACCCGCGCCA AACAACTCGT CGTCCTGGTC GGCTCCCGCC GGGCCCTCGC CGCCGCGGTC
CGCACCGTCG GCGCCGGCCG TCGGCACACC GCCCTCAACC ACCGGCTGGC CGCCGCAACG
CCCTGA
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| Protein sequence | MADVTAAPRP ALATLDAVLE RLTYVNEESG YTVARVATDR GSDLLTVVGA LLGAQPGESL
RLHGRWSSHP KYGRQFEVDS YTTVLPATIQ GIQRYLGSGL VKGIGPVFAE RIVAHFGLET
LRIIEEEPAR LVEVPGLGPK RTAKITAAWE EQQAIKEVMV FLQGVGVSTS LAVRIYKQYG
DTSTDVVTKE PYRLAADVWG IGFKTADTIA QSVGIPHDSP QRVMAGLQYT LSEATDNGHC
YLPEPELIAD ATKILDVPAD LVTRCLDDLV AEEGVVRESL PGGDAEPVRA VYLVPFHRAE
RSLATSLLRL LDDGTDRLPH FAGVDWAKAL TWLKARTGND LAPEQEQAVR LALTSKVAVL
TGGPGCGKSF TVRSIVELAA AKRAKVTLVA PTGRAAKRLS ELTGHPAATV HRLLQLRPGG
DASYDRDNPL DVDLLVVDEA SMLDLILANK LVKAVPPGAH LLLVGDVDQL PSVGAGEVLR
DLLAAPAIPR VRLTQIFRQA AQSGVVTNAH RINAGRPPLL QGLPDFFLFA CDDTEATAER
TVDVACSRIP AKFRLDPRRD VQVLTPMHRG PAGSGALNTL LQQRLTPHRE GQPERRAGGR
VFRIGDKVTQ IRNNYDKGEA GVFNGTLGIV TQLSTEEQTL TVRTDEDESI DYDFDELDEL
AHAYAMTIHR SQGSEYPAVV IPLTTSAWMM LQRNLLYTAV TRAKQLVVLV GSRRALAAAV
RTVGAGRRHT ALNHRLAAAT P
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