Gene Strop_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0205 
Symbol 
ID5056642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp235592 
End bp235999 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content65% 
IMG OID640472476 
Producthypothetical protein 
Protein accessionYP_001157068 
Protein GI145592771 
COG category[S] Function unknown 
COG ID[COG3304] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGACG TACGTCACCC TGGCAGCATG ATTCGACTCG TCCTGAACGT GTTGTGGCTC 
ATCTTCGGCG GCGGAATCGT GCTGGCCTTC GGCTACTTCG TCGCCGCGTT GATCTGCTTC
GTCCTCGTCG TCACCATCCC GTTCGGGGTC GCCTCGCTGC GGCTGGCTTC GTACTCGTTG
TGGCCCTTCG GCCGCACCCT GGTCACCAAG CCGGGGGCTG GCGTCGCATC CGGGTTGGCG
AACGTGCTCT GGGTGCTGCT GGCCGGCTGG TGGCTGGCGC TGTCTCACCT GGTCGCCGGG
GTATCCCTCT GTATCACGAT CATTGGCATT CCGTTCGGCA TCGCCAACTT CAAGCTCGTG
CCGGCAGCAT TCTGGCCACT CGGCCAGGAG GTCATCGAGG TCCGCTGA
 
Protein sequence
MADVRHPGSM IRLVLNVLWL IFGGGIVLAF GYFVAALICF VLVVTIPFGV ASLRLASYSL 
WPFGRTLVTK PGAGVASGLA NVLWVLLAGW WLALSHLVAG VSLCITIIGI PFGIANFKLV
PAAFWPLGQE VIEVR