| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0193 |
|---|
| Symbol | |
|---|
| ID | 5056629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 222995 |
|---|
| End bp | 224191 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640472463 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_001157056 |
|---|
| Protein GI | 145592759 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCGCT TTCCCGCCAC CGCCGGACAT GTACTGTTCC TCAACTGGCG GGACACCCGG
AACCCCGAAG GTGGTGGATC CGAGGTGTAC GTCGAGCGGA TCGCCGCGGA GCTGGTTGCC
CGCGGCTTCC GCGTCACGCT GTTCTGCGCC GCACATCGTC GGGGCCGTCC CGAGGAGGTC
AATGACGACG GAGTCCGGCT GATCAGACGG GGCGGGCGCC ACACCGTGTA CCTGTGGGCC
GCGCTCTGCT ACCTGGCCGG CGCACTCGGG TTCGGCCCCC TGTCCCGCCG ACACGGCCCC
CGACCGAAGG TGCTCGTCGA CGTCTGCAAC GGTCTACCGT TCATGACCCC GCTATGGGCC
CGACGACCGA TTATCAAGCT AATCCACCAC ATTCATCGAG AACAATGGTG TGTGGTACTT
CCACCTTGGG CAGCCCGGTT TGGCTGGTGG GTGGAGTCAT CATTCGCCAT ACGCGCCTAC
CGGCGCTGCC ACCACGTCAC GGTCTCCGAA GCCACCCGTC AGGAGCTGGT CCAGCTCGGT
GTACCCGCGG GTCAGGTCTC CGTGGTGCAC AACGGCACCC CGCCGCTCCC ACACACTGAC
GCCGAACGTG CACCCTCCCC ACTGCTCGTC ACGCTCAACC GGCTGGTCCC ACACAAGCGC
GTCGAGGTGG CACTACGGGC GGTCGCCACC CTCGCCGACG AGCTGCCCCA GCTACGGCTG
GTGGTCGCCG GACAGGGCTG GTGGGAGGGG CGGCTCCGCG AGGTCGCCAA CGACCTGGGC
ATCACCGGCC GAGTGGAGTT CCGGGGGTTC GTGACGGAGG AGGAGAAGGC GACCCTCCTC
GCCTCAGCCT GGGTGGCGCT GACCCCGTCA CTGAAGGAAG GGTGGGGTCT GACCATTGTG
GAGGCCGGAT CGGCCGGCAC CCCGACGGTC GCGTTCCGGA GCGCGGGCGG CGTGGGGGAG
GCGGTGGTGG ACGGCCAGAC CGGACTTCTC GCCGACGACA TCGACGACTA CGTGGCGAAG
GTGCGGTCCC TCCTCCACAA CGCCGAGCTA CGGCACCAGC TGGGTGCGGC GGCCCGGGAG
CACGCGGCGA ACTTCACCTG GCCCGCCGCC GGAAGCCACT TCGCGGCCGT GCTGGAGAGT
GTGGAGTCGC CCCGTCATCC GGATTCACGG GGCGCCCCGT CCTACCTGCT GCCGTAG
|
|---|
| Protein sequence | MERFPATAGH VLFLNWRDTR NPEGGGSEVY VERIAAELVA RGFRVTLFCA AHRRGRPEEV
NDDGVRLIRR GGRHTVYLWA ALCYLAGALG FGPLSRRHGP RPKVLVDVCN GLPFMTPLWA
RRPIIKLIHH IHREQWCVVL PPWAARFGWW VESSFAIRAY RRCHHVTVSE ATRQELVQLG
VPAGQVSVVH NGTPPLPHTD AERAPSPLLV TLNRLVPHKR VEVALRAVAT LADELPQLRL
VVAGQGWWEG RLREVANDLG ITGRVEFRGF VTEEEKATLL ASAWVALTPS LKEGWGLTIV
EAGSAGTPTV AFRSAGGVGE AVVDGQTGLL ADDIDDYVAK VRSLLHNAEL RHQLGAAARE
HAANFTWPAA GSHFAAVLES VESPRHPDSR GAPSYLLP
|
|---|
| |