| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0176 |
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| Symbol | |
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| ID | 5056609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 191238 |
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| End bp | 192656 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640472443 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001157039 |
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| Protein GI | 145592742 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.167019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACGTCA AACCCGCTCC AGACGACTCG ACGCCCGACG AAACGGCGAC CGAGCAGAAC
AGCCGTAACG ATCGTGGGCG CACCCGGGTC CTGACCCTGT CCACCATCGG CTTCACCGTC
ATGTTCGCGG TGTGGCTCAT GTTCGGCATC CTCGGCAAGC CGATCAGCGA GGAGTTCGGG
CTCTCCGAGG TGCAGCTGTC CTGGATCATC GCCGCCGCCG TGCTCAACGG TTCGCTCTGG
CGACTCCCCG CCGGCATTGT GGCGGACCGG GTCGGTGGGC GCCGGGTGAT GACCGCGATG
CTCCTCCTGA CCGCGGTCGC CTCATTCCTG GTTTCCCGCG CCGATTCGTA CGCGATGCTG
CTGGTGCTGG CGTTCCTGGT CGGTTTCGCT GGTAACTCCT TCACGGCGGG TATCGCCTGG
AACTCCGCCT GGCAGCCGCG GGAGAAGCAG GGGTTCGCGC TCGGCCTGTT CGGTGCCGGC
AACGTCGGCG CCTCCGTCAC CAAGTTCATC GGCCCGCCGC TGATCGCCGG GACCGCCGGC
GCCACCTACC TCGGCGTCGT TGAGGGCGGC TGGCGCCTCG TCCCCGTCGT CTACGCGGTG
TTGCTGCTCG CCCTCGCCGC GGCCACCTGG TTCATCACTC CGCGTCAGGA CCGCGTACCG
AGCCACGGCA CCCCGCTACG CACACAGCTC GAGCCGCTCA AGCAGCTGCG AGTGTGGCGA
TTCAGCCTGT ACTACGTGGC GGTGTTCGGT GCCTACGTGG CGCTCGCCGC GTGGCTGCCG
ACCTACTACA TGAACAACTA CGACGTGTCC CTGCAGACCG CGGCCTACCT GACCGCCCTG
TACATCTTCC CGGCCTCGCT GCTGCGACCG GTCGGCGGAT CACTCTCCGA CCGTCTGGGG
GCCCGCCGGG TCATGTACTG GACGTTTGGC CTCATGCTGC TCAGCACGGG GATTCTGATG
ATGCCCCCGG GCCACATCGT CGTCGACCAC CCTGACGGCA CGCAGACCAC CCACCTCGCC
TACCAGCTCG GCATCGTGCC CTTCACCCTG CTGGTCGTCC TGCTCGGCTG CGCCATGGGC
ATCGGCAAGG CCGCGGTGTA CAAGCACATC CCGGAGTACT TCCCACGCCA GGTGGGGGCG
GTGGGCGGCC TGGTCGGCAT GCTCGGCGGC CTCGGCGGGT TCTTCCTGCC TCCGCTGTTC
GCCTACACCA AGGCCTGGAC CGGGCTCCCG TCGAGCACCT TCCTGGTCCT GTTCGTACTC
ACCGTCATCT GCGCGGTGTG GATGCACCTA ACCGTCGTGC GCATGCTGCA CGGTGAATCG
CCCCAGCTTG CCACCCACTT CGAAAAGCCA GAACCCGCTG ACCAGCCGGC CGCTCCCGCC
TCGGCGGCGA CCCGTGCGTC CAAGGAGGCC CACGTATGA
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| Protein sequence | MYVKPAPDDS TPDETATEQN SRNDRGRTRV LTLSTIGFTV MFAVWLMFGI LGKPISEEFG
LSEVQLSWII AAAVLNGSLW RLPAGIVADR VGGRRVMTAM LLLTAVASFL VSRADSYAML
LVLAFLVGFA GNSFTAGIAW NSAWQPREKQ GFALGLFGAG NVGASVTKFI GPPLIAGTAG
ATYLGVVEGG WRLVPVVYAV LLLALAAATW FITPRQDRVP SHGTPLRTQL EPLKQLRVWR
FSLYYVAVFG AYVALAAWLP TYYMNNYDVS LQTAAYLTAL YIFPASLLRP VGGSLSDRLG
ARRVMYWTFG LMLLSTGILM MPPGHIVVDH PDGTQTTHLA YQLGIVPFTL LVVLLGCAMG
IGKAAVYKHI PEYFPRQVGA VGGLVGMLGG LGGFFLPPLF AYTKAWTGLP SSTFLVLFVL
TVICAVWMHL TVVRMLHGES PQLATHFEKP EPADQPAAPA SAATRASKEA HV
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