| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0156 |
|---|
| Symbol | |
|---|
| ID | 5056589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 171178 |
|---|
| End bp | 172311 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640472423 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001157019 |
|---|
| Protein GI | 145592722 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTAC GGGGGCGGTC GACAGCTGGG ATGCGCGGCT TGGCCGCCGT CCCAGCCTAT
GTGGTGATGC AGCCAACCAC GCTCTGCAAT CTCGACTGCG TGTACTGCTA CCTCCCGCTT
CGCCACGCCG ACCGGCGGAT GCCGGTCGGC GTGGCGAAGG CGGTGGCCGC ATCGGTCAAT
CCATGGGCGC GGGCCGGGCG ATTCTCCGTC GTGTGGCACG GTGGCGAGCC GCTCGCCGCC
GGGCAGGAGC TGCTCGGCGC GCTGATTGCC CCGTTCGGGC CGGAGGTCGA GCATCACGTC
CAGACCAACG CGACGCTGAT CGACGACGCC TGGTGTCGAT TCTTCGCGGA GCACCAGATC
CGGGTCAGTG TCAGCGTGGA CGGGCCGCGG GAGCGCAACG TGGATCGGGT CACTCGGGGC
GGGCGTCCCG CGTATGCCCA CATCATGCGG GGAGTCGAGG CGCTGCGTCG ACATGGGCTG
CCGTTCTCCG CGCTGGCCGT GGTGGGGCGC CCCGAGCTGG GTCTCGCCCG CGAACTGTAC
GACTTCTTCC TCGATCTTGG CCCGGATGTG GTGGGCGTGA ACATCGAGGA GACCGAGGGG
GTCAATACGC GGGCCAACTG CCACGACGCG GCTGCGGTGA CCGCCTTCTG GTCAGAACTG
GTGGCGGCCT GGCGCCGGAA CCCCCGTATC CACCTGCGTG AGGTTGAGTG GTCCCTGCGG
TACGCCGCTG CGGTGTTGGA CGGCGTCGAG GACCAGGTGC TGCCCCGCCG GCTGGATCCG
ATCCCCACGG TCGGCCACGA CGGTTCGGTG ACCGTGCTCT CGCCCGAACT GGCCGGCTTC
ACGAACCCCC GGTACGGCGA CTTCAGCAGC GGCAACGTGC TGGTCACTTC GCTGGCAGAG
ATCCTGGCCG AGGCCGCGGC GACACCCTGG GTCGGGGAGT TCCTCGCCGG GGTGGAGGCT
TGCCGGGCAT CGTGTTCCTA CTTCGGCTTC TGCGGCGGTG GTCACGCGGC CAATCGCTAC
TTCGAGCAGG GACGTTTTGA CGGTACGGAG ACCGAGCACT GCCGCAACAG CAAGATCCGC
CTACTGGAGG GAGTGTTGGA GCATGCCCGA GAACACCGGT CCCCGGCAAC CTGA
|
|---|
| Protein sequence | MAVRGRSTAG MRGLAAVPAY VVMQPTTLCN LDCVYCYLPL RHADRRMPVG VAKAVAASVN
PWARAGRFSV VWHGGEPLAA GQELLGALIA PFGPEVEHHV QTNATLIDDA WCRFFAEHQI
RVSVSVDGPR ERNVDRVTRG GRPAYAHIMR GVEALRRHGL PFSALAVVGR PELGLARELY
DFFLDLGPDV VGVNIEETEG VNTRANCHDA AAVTAFWSEL VAAWRRNPRI HLREVEWSLR
YAAAVLDGVE DQVLPRRLDP IPTVGHDGSV TVLSPELAGF TNPRYGDFSS GNVLVTSLAE
ILAEAAATPW VGEFLAGVEA CRASCSYFGF CGGGHAANRY FEQGRFDGTE TEHCRNSKIR
LLEGVLEHAR EHRSPAT
|
|---|
| |