Gene Strop_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0149 
Symbol 
ID5056582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp160862 
End bp161545 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID640472416 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_001157012 
Protein GI145592715 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5640] Secreted trypsin-like serine protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC GATCCCTGGT CGCGGTCCTC GCCACCGCGG TCGCCGGCGT GCTCGGCGCC 
AGCTCAGGCG CCGTCGCCAA CCCCGGCCCC ACCCCCCTGA TCATCGGCGG CGGCTACGTC
TCATCCGCGC CGTGGGCCGC CGCCGTATTC AGCAACGGCT CGTTCACCTG CTCCGGCACG
ATCATCGCCC CGGAGTGGGT GCTCACCGCC CGACACTGCG TCGGCGGGTC GATGTCGGTC
CGGGTCGGCT CGGTCTACCG CTCCTCCGGC GGCACCACCC GCTCCGTCAC CGCCGCCTAC
GGCCGGTACG ACCTGGCTCT GATGCGGCTG AGCAGCTCGG TCAACACCAG CTACGTGACG
CTGGCCAACA GCAACCCGCC GATCGGGTCG ACCAACTCGA TCTACGGCTG GGGGATGACC
TGCTACAGCG GCTGCTCGGC GTCCAGCCAG CTGAAGACCG CAAACGTCCG GGTTACCAGC
AACAACGCCA GCGACGCGTA CGGCGGACAG GCGATCCAGA CCAACCGGAT CAACGGCAAC
GCCTGGCGGG GTGACTCGGG CGGACCACAG TTCTACAACG GCCGTCAGGT CGGCGTCGCC
TCCCTCGCCA ACGGCGTCAA CCTCCAGATC TACGGCAGTG TCGCGTACAA CCGCTCCTGG
ATCACCTCGA TTTCCGGTGT CTGA
 
Protein sequence
MRIRSLVAVL ATAVAGVLGA SSGAVANPGP TPLIIGGGYV SSAPWAAAVF SNGSFTCSGT 
IIAPEWVLTA RHCVGGSMSV RVGSVYRSSG GTTRSVTAAY GRYDLALMRL SSSVNTSYVT
LANSNPPIGS TNSIYGWGMT CYSGCSASSQ LKTANVRVTS NNASDAYGGQ AIQTNRINGN
AWRGDSGGPQ FYNGRQVGVA SLANGVNLQI YGSVAYNRSW ITSISGV