Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0149 |
Symbol | |
ID | 5056582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 160862 |
End bp | 161545 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472416 |
Product | peptidase S1 and S6, chymotrypsin/Hap |
Protein accession | YP_001157012 |
Protein GI | 145592715 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5640] Secreted trypsin-like serine protease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCATCC GATCCCTGGT CGCGGTCCTC GCCACCGCGG TCGCCGGCGT GCTCGGCGCC AGCTCAGGCG CCGTCGCCAA CCCCGGCCCC ACCCCCCTGA TCATCGGCGG CGGCTACGTC TCATCCGCGC CGTGGGCCGC CGCCGTATTC AGCAACGGCT CGTTCACCTG CTCCGGCACG ATCATCGCCC CGGAGTGGGT GCTCACCGCC CGACACTGCG TCGGCGGGTC GATGTCGGTC CGGGTCGGCT CGGTCTACCG CTCCTCCGGC GGCACCACCC GCTCCGTCAC CGCCGCCTAC GGCCGGTACG ACCTGGCTCT GATGCGGCTG AGCAGCTCGG TCAACACCAG CTACGTGACG CTGGCCAACA GCAACCCGCC GATCGGGTCG ACCAACTCGA TCTACGGCTG GGGGATGACC TGCTACAGCG GCTGCTCGGC GTCCAGCCAG CTGAAGACCG CAAACGTCCG GGTTACCAGC AACAACGCCA GCGACGCGTA CGGCGGACAG GCGATCCAGA CCAACCGGAT CAACGGCAAC GCCTGGCGGG GTGACTCGGG CGGACCACAG TTCTACAACG GCCGTCAGGT CGGCGTCGCC TCCCTCGCCA ACGGCGTCAA CCTCCAGATC TACGGCAGTG TCGCGTACAA CCGCTCCTGG ATCACCTCGA TTTCCGGTGT CTGA
|
Protein sequence | MRIRSLVAVL ATAVAGVLGA SSGAVANPGP TPLIIGGGYV SSAPWAAAVF SNGSFTCSGT IIAPEWVLTA RHCVGGSMSV RVGSVYRSSG GTTRSVTAAY GRYDLALMRL SSSVNTSYVT LANSNPPIGS TNSIYGWGMT CYSGCSASSQ LKTANVRVTS NNASDAYGGQ AIQTNRINGN AWRGDSGGPQ FYNGRQVGVA SLANGVNLQI YGSVAYNRSW ITSISGV
|
| |