Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0125 |
Symbol | pyrE |
ID | 5056558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 134691 |
End bp | 135230 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472392 |
Product | orotate phosphoribosyltransferase |
Protein accession | YP_001156988 |
Protein GI | 145592691 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGACC ACGACGACCT GCGTAAATTC ATCACCGACC TGGCAGTGGT CCATGGTCGG GTGGTGCTGT CCTCGGGGCG CGCGGCGGAC TGGTATGTGG ACCTGCGGCG CGTAACGCTG CATCACGAGG CCGCCCCGTT GGTGGGCCGG GTGCTGCGGG AGCTGACTGC CGACTGGGCG TACGACGCGG TGGGTGGGCT CACCCTCGGC GCCGACCCGA TCGCGCTGTC GATGTTGCAC GCCACCACTG GTGCCGACCG TCCGTTGGAC GCCTTCGTGG TTCGTAAGGC GGGTAAGGCG CACGGGCTAC AACGCCGGAT CGAGGGGCCC GACGTGGCCG GGCGTCGGGT GCTCGCAGTG GAAGACACCT CCACCACGGG CCAGAGCGTG TTGACTGCTG TCGAGGCCCT ACGTGAGGCC GGGGCCGAGG TGATGGGGGT AGCGGTTATT GTTGATCGAG GTGCCGGCGC CGCGGTCCGA GCCGCCGGAC TGCCGTACCG GGCTGCCTAT ACGTTGGCTG ACCTCGGCCT TGTGGCGTAA
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Protein sequence | MGDHDDLRKF ITDLAVVHGR VVLSSGRAAD WYVDLRRVTL HHEAAPLVGR VLRELTADWA YDAVGGLTLG ADPIALSMLH ATTGADRPLD AFVVRKAGKA HGLQRRIEGP DVAGRRVLAV EDTSTTGQSV LTAVEALREA GAEVMGVAVI VDRGAGAAVR AAGLPYRAAY TLADLGLVA
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