Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0105 |
Symbol | |
ID | 5056538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 111115 |
End bp | 112059 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640472372 |
Product | Type II site-specific deoxyribonuclease |
Protein accession | YP_001156968 |
Protein GI | 145592671 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0761637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTTG TCAGGAAGAT CGAGGAGGCT AGTCAGATTC TGACTGCTCT CGGCATGGAC GCCGAGCGGT CCAATGAACG CTCAGCGCAG ACTCTTCTCG CCCTACTGCA TTTGAAGAGT GATGACACTT GGGCGGATTC GGCCAATCCG ATGCTAGGGA CTCGAGCAAT CATGGATTGG ATACGTGACG AATACGGGCG GAGCTACGCC GCAAATACGC GGGAGACAAT CAGGCGCTTT ACCCTCCATC AGTTTGCCGA CGCGTTCTTG ATCCAGCAGA ATCCTGACCA ACCCACCCGA CCGGTGAATT CGCCAAAATG GAACTATCAG GTCACGAGCG AGGCGCTCAC GGTAGTCAAG GCGTTTGGTA CTCCGGACTT CGATTCTGTG CTGAGCGAAT ATCTGACGAG GAAGCCGGGT CTAAAGGCTC AGTACGCGAC AGCGCGTGCG AGAAACCGCA TCCCCGTTAC CCTACCCGGC GGGAAACCGT TCACCTTGTC CCCGGGTGGG CAGAACGTGC TCATAAAGCA GGTGGTCGAG GAGTTCTGCC CCCAGTTCAC CCCTGGTGCT GAAGTACTCT ACGTGGGCGA CGCGGATGCC AAGTGGGCCC TCTTCGAGGC CGAGCGGCTG GCCGAGTTTG GCGTATCCAT CGATCAGCAC GGCAAGATGC CCGATCTTGT CGTATATCTT CCCGACAAGG ACTGGATCGT GCTCGTGGAA GCTGCCTCCT CGCACGGTCC AGTTGATGCC AAACGGCATG GTGAACTAGC TGCACTTTTC AAAGGTGCAA CACCCGGACT GGTGTACATC TCCTGCTTCC CGGATCGTAG AGAGATGCGT AAATATCTCC ACCGGATTGC CTGGGAGACC GAAGTATGGT GCGCCGAAGA CCCGACACAC CTGATTCACT TCAACGGCGA ACGGTTCCTC GGTCCATATA GCTAG
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Protein sequence | MSVVRKIEEA SQILTALGMD AERSNERSAQ TLLALLHLKS DDTWADSANP MLGTRAIMDW IRDEYGRSYA ANTRETIRRF TLHQFADAFL IQQNPDQPTR PVNSPKWNYQ VTSEALTVVK AFGTPDFDSV LSEYLTRKPG LKAQYATARA RNRIPVTLPG GKPFTLSPGG QNVLIKQVVE EFCPQFTPGA EVLYVGDADA KWALFEAERL AEFGVSIDQH GKMPDLVVYL PDKDWIVLVE AASSHGPVDA KRHGELAALF KGATPGLVYI SCFPDRREMR KYLHRIAWET EVWCAEDPTH LIHFNGERFL GPYS
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