Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0100 |
Symbol | |
ID | 5056533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 105874 |
End bp | 107712 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640472367 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_001156963 |
Protein GI | 145592666 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACCG CGCCTCGCGT CCGAGCACCC GAGCTGAAGG GCCGTCGCTG GCTGAACACC GGCGGACGAC ACCTGGACCT GGCGGACCTT CGAGGCCGCA TAACCGTCCT CGACTTCTGG ACCTTCTGCT GCATCAACTG CCTGCACGTG CTCGACGAGC TACGTCCCAT CGAGCAGAAG TACGCCGACG TCCTCGTGGT CATCGGCGTC CACTCGCCCA AGTTCGAACA CGAGAAGGAC CCGGACGCCC TGGCCGACGC CGTCGAGCGG TACGGCGTAC ACCACCCGGT GCTCGACGAC CCCGAACTGA ACATGTGGCA GCAGTACGCC GCCCGGGCCT GGCCGACCCT GGCCGTGATC GACCCCGAGG GGTACGTGGT GGCCACGATG GCCGGTGAGG GACATGCCGA GGGCCTGGTC CGGCTCGTGG ACGACCTGAT CGCCACCCAC GAGGCCAAGG GCACCCTGCG CCGGGGTGAC GGACCGTACG TGCCGCCGGC CGAGCCGGAG ACCACGCTGC GTTTTCCCGG CAAGTCTGTC GTACTCGACA ACGGGAACCT GCTGGTGTCG GACTCGGCCC GGCACTCCCT CGCGGAGCTG GCCCCCGACG GCGAGACGCT GCTCCGCCGG ATCGGCACCG GCGCACGCGG CCGGGCCGAC GGGACGGCCA CAGCGGCCAC CTTCGCCGAG CCGCAGGGGC TCTGCCTGCT ACCGGCCCAG GTCTCCCGGC TGGTCGGCTA CGACCTGGTC GTCGCCGACA CCGTCAACCA CCTGCTGCGC GGCGTACGCC TCGCCACCGG CGAGGTGGTC ACCGTGGCCG GCACCGGCCG GCAGTGGCGT TCCACCGTGG ATGACCACGC CCACGACGCC CTCTCGGTCG ACCTCTCCTC CCCCTGGGAC CTGGCCTGGT ACGACGACCG CCTCGTGATC GCCATGGCCG GCATCCACCA GCTCTGGTGG TTCGACCCGG TGAAGCGCAC CACCGGCATG TACGCGGGCA GCACCGTCGA GGCCCGCAAG GACGGGCCAC TGGCCGAGGC GTGGCTGGCC CAGCCCTCCG GCCTGTCGGT CTCCGCCGAC GGCAGCCGGC TCTGGGTGGC CGACAGCGAG ACCAGCGCGG TCCGGTACGT CGAGAACGGC ATCCTGACCA CCGCGGTCGG GCAGGGGCTC TTCGAGTTCG GGCACGTTGA CGGGCCGGCG GCGCAGGCGC TACTCCAGCA TCCGCTGGGG GTGTGCGCGT TGCCGGACGG ATCGGTGTTG ATCGCCGACA CGTACAACGG GGCGGTCCGC CGCTACGACC CGGAGTCGGA CTCGGTGGGC ACGGTCGCCG ACGGGCTCGC CGAGCCGAGC GACCTGCTGC TCACCCCGGA CGGCGGGGTG CTGGTCGTGG AGTCCGCCGC CCACCGGCTG ACCCGGCTCG CGCCGGGCGC GCTCACCGCC GCCGGGGCCA GCACCGTCAA CGGCCCGCGG CACCGCACCG AGCGGAAGCC GACCGAACTG CGAGCCGGCG CGGTGACCCT GGAGGTCATC TTCACCCCGG CACCCGGTCA GAAGCTCGAC GACAGCTACG GCCCGTCCAC CCGGCTGGTG GTCTCGGCGT CCCCGCCGGA GTTGCTCCTG TCCGGCGCGG GCACCAGCAC CGAGCTGTCC CGCGAGCTGG TGATCAGCGA TTCGGTCCCT GAAGGCGTGC TCCAGGTGAC TGCCCAGGCG GCGACCTGTG ACGCCGACGT GGCGCACGCC GCGTGCCACC TGACCCGGCA GGACTGGGGT GTGCCGATCT GGGTGGTCGA CGATGCCGCC GACCGGCTCC CACTGGTGCT GCGCGGCATG GACGCCTGA
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Protein sequence | MATAPRVRAP ELKGRRWLNT GGRHLDLADL RGRITVLDFW TFCCINCLHV LDELRPIEQK YADVLVVIGV HSPKFEHEKD PDALADAVER YGVHHPVLDD PELNMWQQYA ARAWPTLAVI DPEGYVVATM AGEGHAEGLV RLVDDLIATH EAKGTLRRGD GPYVPPAEPE TTLRFPGKSV VLDNGNLLVS DSARHSLAEL APDGETLLRR IGTGARGRAD GTATAATFAE PQGLCLLPAQ VSRLVGYDLV VADTVNHLLR GVRLATGEVV TVAGTGRQWR STVDDHAHDA LSVDLSSPWD LAWYDDRLVI AMAGIHQLWW FDPVKRTTGM YAGSTVEARK DGPLAEAWLA QPSGLSVSAD GSRLWVADSE TSAVRYVENG ILTTAVGQGL FEFGHVDGPA AQALLQHPLG VCALPDGSVL IADTYNGAVR RYDPESDSVG TVADGLAEPS DLLLTPDGGV LVVESAAHRL TRLAPGALTA AGASTVNGPR HRTERKPTEL RAGAVTLEVI FTPAPGQKLD DSYGPSTRLV VSASPPELLL SGAGTSTELS RELVISDSVP EGVLQVTAQA ATCDADVAHA ACHLTRQDWG VPIWVVDDAA DRLPLVLRGM DA
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