| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0089 |
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| Symbol | |
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| ID | 5056522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 97039 |
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| End bp | 98892 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640472356 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001156952 |
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| Protein GI | 145592655 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACT ACAAGAGCAA CCTTCGGGAC CTCGAGTTCA ACCTGTTCGA GGTGTTCGGG
GCGGACCGGG CGTTCAGCCA GGCTCCCTAC ACGGAGTTGG ACGTCGACAC CGCCCGTAGC
TTCCTCGCCG AGGTCGACCG CCTGACCCGG GAAGACCTGG CAGCCAGCTA CACGGACAGC
GACCGTAACC CGCCGGTCTT CGACCCGGCG ACGCACACCG CGCCGCTGCC GGAGTCGTTC
AAGAAGTCGT ACCGCCGGTT CATGGACGCC GAGTTCTGGC GGCTGGACCT GCCCGAGGCG
CTCGGCGGCA GCAACGCACC CCGCGCCCTC TGGTGGTCGT TGGCCGAGCT GGTGCTGGGT
TCCAACGCCC CGGTCTGGAT GTACGCCTCC GGCCCGTCGT TCGCGCACGT CCTGCACGTT
GAGGGCACCG AGCGGCAGCG GAAGTGGGCC AAGCTCTTCA TCGACCAGGG CTGGGGCTCC
ACGATGGTGC TGACCGAGGC GGATGCCGGC TCGGACGTCG GCGCCGGCCG GGCCCGCGCC
ATTCCGCAGC CGGACGGCTC GTGGCACATC GAGGGCGTCA AGCGTTTCAT CACCTCCGGC
GAGCATGACC TCAGCGACAA CATCGTCCAC TATGTGCTGG CCCGGCCGGT CGGTGTCGAG
GGCGTGGGTG GCCCGGGCAC CAAGGGCCTC TCCCTCTTCG TCGTGCCGAA GTACCACTTC
AACGAGGAGA CCGGCGAACT GGGCGAGCGC AACGGTGTCT TCGCCACCAA CGTCGAGCAC
AAGATGGGCC TGAAGGTCTC GAACACCTGC GAGCTGACCT TCGGCGAGCA CGGCGTGCCG
GCCCAGGGTT GGCTGTTGGG CGAGAAGCAC GACGGCATCC GGCAGATGTT CATGATCATC
GAGTACGCCC GGATGATGGT CGGTACGAAG GCGATCGCCA CCCTCTCCAC CGGTTACCTG
AACGCGCTCG AGTACGCCAA GAGCCGGGTG CAGGGCGCCG ACCTGACCCA GATGACCGAC
AAGAGCGCTC CCCGGGTCAC GATCACCCAC CACCCGGACG TACGCCGTTC GCTGCTGCTA
CAGAAGTCGT ACGCCGAGGG GCTGCGGGCC CTGGTCTGCT ACACCGCAGG TTGGCAGGAC
AAGGTCGCCA TCGCCGAGGC GGCCGGCGAC GAGAAGGCCG TCGAACTGGC CAAGCGGGTC
AACGACCTGC TGCTGCCGCT GGTCAAGGGG GTCGGCTCGG AGCGGGCGTA CGAGCTGCTC
GGCCACGAGT CACTACAGAC CTTCGGTGGC TCCGGTTTCC TCCAGGACTA CCCGCTGGAG
CAGTACGTCC GGGATGCCAA GATCGACACC CTGTACGAGG GCACCACGGC GATCCAGAGC
CTCGACCTGA TCTTCCGGAA GGTCGTCCGG GACAACGGCA AGGCCCTGAT GGCGGTCGCC
GGTGAGATCC AGGAGTTCAT CTCCGCCGAG GGCGGCAACG GTCAGCTCAA GGACGAGCGG
CAGGCGCTCG GCCGCGCCCT GGGCGAGATT CAGAGCATCC TCGGCGTGCT GACTGGCTGG
CTGGGTGAGG CGCAGGGCGG CGAGACCCGG GCGCTGTACA AGGTCGGCCT GAGCAGCCGC
CGATTCCTGC TCGCCATCGG TGACCTGGTG GTGGGCTGGC TGCTGCAGCG GCAGGCCGAC
GTGGCGCTGA CGGCGCTCGC CGGGGACGCC TCCACCGACC GGGACTTCTA CACCGGCAAG
GTGGCTGCCG CCCGGTTCTT CGCCCGTGAG GTGCTACCGC GCATCGGTGC CGATCGGCGC
ATTATCGAGA ACGTCGACCT GAGCGTCATG GACCTCCCGG AGGAGGCGTT CTGA
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| Protein sequence | MTHYKSNLRD LEFNLFEVFG ADRAFSQAPY TELDVDTARS FLAEVDRLTR EDLAASYTDS
DRNPPVFDPA THTAPLPESF KKSYRRFMDA EFWRLDLPEA LGGSNAPRAL WWSLAELVLG
SNAPVWMYAS GPSFAHVLHV EGTERQRKWA KLFIDQGWGS TMVLTEADAG SDVGAGRARA
IPQPDGSWHI EGVKRFITSG EHDLSDNIVH YVLARPVGVE GVGGPGTKGL SLFVVPKYHF
NEETGELGER NGVFATNVEH KMGLKVSNTC ELTFGEHGVP AQGWLLGEKH DGIRQMFMII
EYARMMVGTK AIATLSTGYL NALEYAKSRV QGADLTQMTD KSAPRVTITH HPDVRRSLLL
QKSYAEGLRA LVCYTAGWQD KVAIAEAAGD EKAVELAKRV NDLLLPLVKG VGSERAYELL
GHESLQTFGG SGFLQDYPLE QYVRDAKIDT LYEGTTAIQS LDLIFRKVVR DNGKALMAVA
GEIQEFISAE GGNGQLKDER QALGRALGEI QSILGVLTGW LGEAQGGETR ALYKVGLSSR
RFLLAIGDLV VGWLLQRQAD VALTALAGDA STDRDFYTGK VAAARFFARE VLPRIGADRR
IIENVDLSVM DLPEEAF
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