Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0061 |
Symbol | |
ID | 5056494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 70484 |
End bp | 71194 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640472328 |
Product | C-5 cytosine-specific DNA methylase |
Protein accession | YP_001156924 |
Protein GI | 145592627 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0270] Site-specific DNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.346771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCG GACCGCTGAA TGTGCTGGAG CTGTTCGCTG GCATTGGTGG CCTGTCGCTG GGCCTACAAC GGGCCGGACT GCGGATCGTC GGCCATGTCG AGATCAACCC GTTCTGCCGC GCCGTTCTGC ACAAGCACTG GCCGGAGGTG CCCTGCCATG ACGACGTTCG CACCGCCGCC GCCTGGTGGC GCTCCACCGA CCGGCCGCGC GTCGATGTCG TCGCTGGCGG CTACCCGTGC CAGCCGGAGT CGACCGCCGG CAAACGCCGA GGCACTGATG ACGACCGGTG GCTGTGGCCG GACATGGCCC GGGTCATCCA TGCGATCCGG CCCCGGTACG TCGTCGGGGA AAACGTCATG GGACACCGCA CCAGGGGACT TCGTTTCGTG CTCCGAGACC TCCAACGCCT CGGATACACC GCCAGTGCCG GCATTATCCG AGCTTGCGAG ATGGGCGCCC CACACCCACG ACCAAGGCTG CTCGTCCTGG CCCACACCGA CCGCCCGGGA CGCCACCCGG GGAGCGGGCT GGAACCGCCC CGGACGGCCA CTACCCGAAC GGGTCGGTGG GCCGACGAAC CCCGCCTGGC TCGAATGGCT CATGGGCTTC CCGGCGCGGT GGACCGACGT CGAGCCCTCG GAAATGCGGT CGTTCCCCAC GTCGCCGAAT TCGTCGGCCG CATCATTCTC AACCACCACA CAGGCAGGTA A
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Protein sequence | MNAGPLNVLE LFAGIGGLSL GLQRAGLRIV GHVEINPFCR AVLHKHWPEV PCHDDVRTAA AWWRSTDRPR VDVVAGGYPC QPESTAGKRR GTDDDRWLWP DMARVIHAIR PRYVVGENVM GHRTRGLRFV LRDLQRLGYT ASAGIIRACE MGAPHPRPRL LVLAHTDRPG RHPGSGLEPP RTATTRTGRW ADEPRLARMA HGLPGAVDRR RALGNAVVPH VAEFVGRIIL NHHTGR
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