Gene Strop_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0058 
Symbol 
ID5056491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp67688 
End bp68875 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID640472325 
Productphage integrase family protein 
Protein accessionYP_001156921 
Protein GI145592624 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.251229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACA AGGACGGACA CCGCCGCTAC GGCAGCGTGC GCAAGTTGCC CTCCGGCCGC 
TACCAAGTTC GACACCTCGC GCCGGACGGC ACGATGCGAC CCGGGGATCA GACATTCGCC
CGCAAAACCG AGGCCGAGCG GTATCTAACC CTGATTGAGG CGCAGATGGC CCGCAGGGAG
TGGATCGACC CTAATCGAGG AAAGATCCGG TTGCAGGACT ATGCGGAACG GTGGATCACG
GAACGGCCGA ACCTGCGCCC CCGCACTGTC CATCTGTACC GATGGACGCT GGGCAAGCAC
ATTACGCCGC ACCTGGGCGG CGTGCCGCTC AACCGGATCG ACACACCGAT GGTCCGGGAG
TGGCGCTCCC GTCTGCTCGC CGACGGCGTG TCGCTGACCA TGGCCGCGAA GGCGTACCGA
CTGCTGCGCG CCATCCTGAT GACAGCCGTG AAGGAGGACG AACTGATCAG GATCAACCCG
TGCCGCGTTG TCGGTGCCGA CCAGGAGAAT GCCGCCGAGC GGCCGGTGCT CACCGTTCCG
CAAATCTTTG CCTTGGCCGA GCGGATGCCA GACCGTTTTC GGGCGCTGAT CCTGGTAACC
ACGTTCGGAT GCCTGCGATG GGGTGAAGCG GTCGCCCTGC AGCGGCAAGA CGTCGACCTG
GTCGCCGGCA CGGTACGAGT ACGGCAAGCA TTCGTCGAAC ACCGAGGAAC CGGCCTGATC
CTCGGCCCGC CGAAGTCCCG GGCCGGTGTG CGAACCATCG CGCTACCAAA GGCGGCACTG
CCCATGCTGA AACAGCACGT GAGCAGCCAC GTCGGCGAGG CACCGGAAGC ATTTGTGTTT
ACCGGTGAGA ACGGCCGGAA TCTCTGGCGC GGCAACTTCA ACAAGCTGGT CAAGTGGCCC
GAGGCGGTCG CCGCCGTGGG CGTGCCCGGC CTGCACTTTC ACGACCTGCG GCACACCGGC
AACACGCTCG CGTCGCGAGC GCCGGGCGCG AGCCTGCGCG ACATCATGGC GCGGATGGGG
CACGACAGCC CTCGCGCCGC GCTGATCTAC CAGCACGCCA ACCGGGAGGC CGACCAGGGC
ATCGCCGACG CGATCGACAA GGCGGTCAAG GCGGCCCGGC GCAAGCCGAG CAAGCGCCGG
GTCAAGCGGG CTACCGAGGG CGGCGGACCG GCCACCGAGG CACGCTAA
 
Protein sequence
MPNKDGHRRY GSVRKLPSGR YQVRHLAPDG TMRPGDQTFA RKTEAERYLT LIEAQMARRE 
WIDPNRGKIR LQDYAERWIT ERPNLRPRTV HLYRWTLGKH ITPHLGGVPL NRIDTPMVRE
WRSRLLADGV SLTMAAKAYR LLRAILMTAV KEDELIRINP CRVVGADQEN AAERPVLTVP
QIFALAERMP DRFRALILVT TFGCLRWGEA VALQRQDVDL VAGTVRVRQA FVEHRGTGLI
LGPPKSRAGV RTIALPKAAL PMLKQHVSSH VGEAPEAFVF TGENGRNLWR GNFNKLVKWP
EAVAAVGVPG LHFHDLRHTG NTLASRAPGA SLRDIMARMG HDSPRAALIY QHANREADQG
IADAIDKAVK AARRKPSKRR VKRATEGGGP ATEAR