Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0051 |
Symbol | |
ID | 5056483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 59160 |
End bp | 60725 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640472317 |
Product | sortase family protein |
Protein accession | YP_001156914 |
Protein GI | 145592617 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.447645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGGG CATCGGAGAG CTGGCAACCT GATCGGGACG ACGACCAGAC GGCGTTCCTG CCGCGGCTGG AGCGTCCCTG GCAGCAGCCC CGGCACGAGT CGGAGCAGCC GTCGTCCCCG CCCGGACCCG CGCCCCAACC GCCGAGCCAG CCGGGCGCAC TGCCCCAGTC GGGCGCGCCG AGCCAACCGG GCGCCCTGCC CCAGCCGGGC GCGCCGAGCC AGCCACCGGG GTCAACCGGA ACGCCGCAGC GCCCACCGAC TCAGTCGCCG TGGCACGCGG CCGCTCCCGC CTCCACCCCT CCAGCCGGCT CGGCCTTCGA CGCTGCGTAC CCGCCCACGC CGCCGGCGGC CGACCGGCCA CTCGACCCGC CGACCGCAGC CCACCGGAAT CTTCGGCCCG CATCCCCGCC ACACTCGTCG GAACCGGCCG CCCCTTCCCC CTCGCCGAGC CCGGTCAACC CACGCCGGCC CGCGTGGGAG GGCACCTCAT CGACGGCTGA CGCCCCCACC GCGCTCATCC CCACGACACC GCTGCGGACC GCAGCCCCGA ATGCCAGTCC CGCCCCGAAT GCCAGTCCAG CCCGGAGTGC CGGCGCGGCC CCTGGTGCCG GTGCAGCCCC TGATGCCACC CCGGGCACCA GCCCCACCGC CGATCCGGCG GCCACCGCGC TCATCCCGCG GGTGGCCAGC CACACGCCTC CGGCACTCGA CTCCACCGCC CTGATGGGCG CCGTGCCCCA GCCACCCCGC GACGCCGACT CCACGGCCGA CTCCGCCACC CCCGAGCCGG CCCAGCCGCG CCGGGGTGAG CGGGTGGTCA AGCTACGCCC AGAGCAGTCC GCCCTCGGCT ACAAGAGCGT CTACTCGGAG CTGACCCGGC CGACGTTCCG GTCCCGCCTC CGCACCGGCG TCCGCGCCGC CGGTGAGGTG CTCATCACCT TCGGCATAGT GGTGCTCCTC TTCGCCGGGT ACGAGATCTG GGGGAAGTCG GTGATCGTCA ACGCCCACCA GAACGACCTC AGCCAGCAGC TCGCCGAGGC GTGGGGGCCA ACCGGTGACC CGACTGTGAC GCCCTCCGCC GCTTCCTCGT CCGCCTCCGC GCCACCGACG GTGCAGGGCA TTCCGATCGC CGGCCTGTAC ATCCCGCGGC TCGACAAAAA CTGGATCGTC GTCGAGGGAG TGACCCAGAA GGACCTCCGA TACGCTCCGG GCCACTACCC GACGAGCGCC CTCCCCGGCC AGCTCGGCAA CTTCTCCATC GCCGGGCACC GGAACCGGGC CACCTTCTGG CGACTTGACG AGTTGGACGA CGGCGACGTG ATCGTTGCCG AGGATCGGGA CGAGTGGCAC GTCTACCGCG TCACCCGCAA CCACGTCGTC AAGCCGAGCG AGGTGGCGGT GGTGGCACCG GTTCCCGGCG AGCCGGGCGC CGAGCCGACC GACGCGATGC TCACCCTGAC CACCTGCCAC CCGAAGTTCG ACAACTACGA ACGCCTGATC ATCCACGCGA AGCTGGACCG GACGCAGGCC AAGTCGGCGG GCCGCCCGGC GGAACTGGGG GGCTGA
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Protein sequence | MTRASESWQP DRDDDQTAFL PRLERPWQQP RHESEQPSSP PGPAPQPPSQ PGALPQSGAP SQPGALPQPG APSQPPGSTG TPQRPPTQSP WHAAAPASTP PAGSAFDAAY PPTPPAADRP LDPPTAAHRN LRPASPPHSS EPAAPSPSPS PVNPRRPAWE GTSSTADAPT ALIPTTPLRT AAPNASPAPN ASPARSAGAA PGAGAAPDAT PGTSPTADPA ATALIPRVAS HTPPALDSTA LMGAVPQPPR DADSTADSAT PEPAQPRRGE RVVKLRPEQS ALGYKSVYSE LTRPTFRSRL RTGVRAAGEV LITFGIVVLL FAGYEIWGKS VIVNAHQNDL SQQLAEAWGP TGDPTVTPSA ASSSASAPPT VQGIPIAGLY IPRLDKNWIV VEGVTQKDLR YAPGHYPTSA LPGQLGNFSI AGHRNRATFW RLDELDDGDV IVAEDRDEWH VYRVTRNHVV KPSEVAVVAP VPGEPGAEPT DAMLTLTTCH PKFDNYERLI IHAKLDRTQA KSAGRPAELG G
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