Gene Strop_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0043 
Symbol 
ID5056475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp49945 
End bp50430 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content68% 
IMG OID640472309 
ProductFHA domain-containing protein 
Protein accessionYP_001156906 
Protein GI145592609 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0140722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGAAC TCGTCATCAC CGTTGCCCGG TTCGGGTTCC TGATCCTGTT GTGGATTTTT 
GTCTTCACGG TGGTCGGGGT GATTCGCCGG GACCTCTTCG CAGGTGCCCG CTCTGGTCGG
CTGGTGGCGG CCCCCCGGGG GGTCGGGGCC GTCCTCGGTC AGGGCGGAAA GCCGGCCCGG
GCAAAGCGGG GAAGGGCAGC CCACCAGCTG GTGGTGACCG CCGGCCAGCT GGCCGGCACC
CGTATCACAC TCGGTGAAGC GCAGATCACC ATCGGCCGGG CCGAGGATTC CACCCTCGTG
ATCACCGATG ACTACGCCTC CGCACGACAC GCCCGGCTCG TGCCCCGCGA CGGGCAGTGG
TTCGTCGAGG ACCTCGGTTC GACTAACGGC ACCTACCTGG ATCGCGCTAA GGTCACCGGA
CCTACCCCCG TCCCCCTCGG CGTGCCGATC CGCATCGGGC GCACCTCACT CGAATTACGG
CCATGA
 
Protein sequence
MPELVITVAR FGFLILLWIF VFTVVGVIRR DLFAGARSGR LVAAPRGVGA VLGQGGKPAR 
AKRGRAAHQL VVTAGQLAGT RITLGEAQIT IGRAEDSTLV ITDDYASARH ARLVPRDGQW
FVEDLGSTNG TYLDRAKVTG PTPVPLGVPI RIGRTSLELR P