| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0039 |
|---|
| Symbol | |
|---|
| ID | 5056470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 45230 |
|---|
| End bp | 46789 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640472304 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001156902 |
|---|
| Protein GI | 145592605 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTAT CCCGAAGGTC CGTGTTCGTT GGACTAGCCA CGATGGCCAT GGTGGCGTCC
GCGACCCCCG CCATGGCCGC TGAACCAGTT GGTGAGATCC GTAGTGCGGG GGGCGCTACG
GCCGTAACCG ACAGCTACAT CGTGGTCTTC AAGGACAACG TGGTCAGCCG TGCCACGGTC
GAGACGTCGG TTGATCGTTT GGTGGACCGG CACGGTGGCC AGGTAAGCCG GACGTACAGC
ACCGCGCTCC GCGGAGCCGA ACTGCGGGTG GATGCCGGTG CCGCCGCCCG AATCGCGGCC
GACCCGGCGG TGGCGTACGT GGAGCAGAAC CACCGGGTGT CGATCACCGA CACCCAGACC
AACCCCCCGT CCTGGGGTTT GGACCGAGTT GACCAGCGCG ATCTGCCGCT GGACAACTCC
TACACCTATC CGAACACCGC CAGTGACGTG AACATCTACA TCCTCGACAC CGGCATCCGC
ACCACCCACC AGGACTTCGG CGGCAGGGCC ACCTGGGGCA CCAACACCGC CGACAACAAC
GATACCGACT GCAACGGGCA CGGCACGCAC GTCGCCGGCA CCGCTGCCGG CACGGCGCAC
GGCATCGCCA AGGAGGCCAA CCTGGTGGCG GTGAAGGTGC TGGACTGCGC GGGCAACGGC
ACCTTCGCCG GGGTCGTGGC CGGCGTCGAC TGGGTGACCG CGAACGCGGT CCAGCCCGCG
GTGGCGAACA TGAGCCTCGG TGGCGGTGCG AACAGCGCGC TGGACAACGC GGTGAGCAAC
TCGATCGACT CCGGTGTCAC CTACGCGCTG GCGGCGGGCA ACAGCAGCGC CAACGCCTGT
AACTACTCAC CGGCCCGTAC CCCGGACGCG ATCACCGTCG GGTCTACGAC CAGCACTGAT
GGACTGTCCT GGTTCTCCAA CATCGGCACC TGTCTGGACA TCTTCGCGCC GGGCTCGTCG
ATCACCGCGC CGTGGATCAC CAGTGACACC AGCACGAACA CGATCAGCGG CACGTCGATG
GCATCGCCGC ATGTCGCGGG TGCCGCGGCG TTGGTCCTGT CGGCCAACCC CTCGTACACC
CCGCAGCAGA TTCGGGACGA GCTAGTCGAC AACGCCACCG ACGGCGCGAT CGGCTCCCCC
GGCAGCGGCT CGCCGAACAA GCTCCTCTAC GTCGGTGACG GCGGCACCAC GCCTCCGCCG
CCTCCGCCGC CGGGCTGCTC CGGCACCAAC GACACCGACG TGGCGATCCC GGACGCCGGT
TCCGCGGTGA CCAGCTCGAT CACCATCGCC GGCTGCGACC GGGACGCCGC CGCCACCTCG
ACCGTGGCCG TGGACATTCC CCACACCTGG CGGGGTGACC TCGTCATCGA CCTGATCGCG
CCGGACGGCT CGTCCTACCG GCTGAAGACC AACAACCTGT CCGACTCCGC CGACAACGTC
AACGAGACCT ACACGGTGAA CCTCTCCAGC GAGGCAGCCG ACGGCACCTG GCAGCTCCAG
GTCCGCGATG TCTACCGCCA GGACACCGGC TACATCGACA CCTGGACCCT GACGGTCTGA
|
|---|
| Protein sequence | MGLSRRSVFV GLATMAMVAS ATPAMAAEPV GEIRSAGGAT AVTDSYIVVF KDNVVSRATV
ETSVDRLVDR HGGQVSRTYS TALRGAELRV DAGAAARIAA DPAVAYVEQN HRVSITDTQT
NPPSWGLDRV DQRDLPLDNS YTYPNTASDV NIYILDTGIR TTHQDFGGRA TWGTNTADNN
DTDCNGHGTH VAGTAAGTAH GIAKEANLVA VKVLDCAGNG TFAGVVAGVD WVTANAVQPA
VANMSLGGGA NSALDNAVSN SIDSGVTYAL AAGNSSANAC NYSPARTPDA ITVGSTTSTD
GLSWFSNIGT CLDIFAPGSS ITAPWITSDT STNTISGTSM ASPHVAGAAA LVLSANPSYT
PQQIRDELVD NATDGAIGSP GSGSPNKLLY VGDGGTTPPP PPPPGCSGTN DTDVAIPDAG
SAVTSSITIA GCDRDAAATS TVAVDIPHTW RGDLVIDLIA PDGSSYRLKT NNLSDSADNV
NETYTVNLSS EAADGTWQLQ VRDVYRQDTG YIDTWTLTV
|
|---|
| |