| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_4007 |
|---|
| Symbol | |
|---|
| ID | 8599451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 4240469 |
|---|
| End bp | 4242394 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003310770 |
|---|
| Protein GI | 269122593 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATAA TTCAATTAAA AAATGTATAT AAACAATTTT CCGGGGAGTA TATACTGAAT
AAAATATCAT TCAGTATAGA AAACAGAGAT AAGATAGGTC TTGTGGGACT AAACGGAGCC
GGAAAATCCA CTCTTATAAG AATACTTCTG GGTCTTGAGA CACATGATCA GAATGAATAT
AATGAATTCG GAGAAATAAC AAAGAGTCCC GATCTGCGTA TAGGATACTT ATCGCAGGAA
TATAATTTTT CCGATGAAAA AAATACCGTG TATGAGGAAA TGCTTTCTGT ATTTCATGAT
GAGATGGAAT TATGGAGAAA AATACAGAAG ACTAATATGA AGCTTTCCGT GGCAGAGCCC
GCAGAGCTTG AGGGATTGCT TGAGGAACTG GAAAGACTGA ATTCGGAATA TGAAGCAAAA
GATGCCTACA CTTTAGAATA TAAAATAAAG CAGATTCTTA CAGGTCTGGA ACTGGGAACG
GAGTATTACG ACAGAATGCT GGAAAAATTA AGCGGAGGAG AAAGAGCAAG GGTTTCACTT
GCAAAGCTTC TGCTTCAGGA GCCTGAACTT CTTATTCTCG ATGAGCCTAC GAATCATCTT
GATTTATATT CCATAGAATG GCTGGAAGAC TTTTTGAAGA AATATAACAA GGCATTCCTG
CTTGTATCTC ATGACAGATA TTTTTTGGAT AATGTATGTA ATAAGATGTT TGAGCTGGAA
AATAAAAAAT TATATAAATA TGACGGAAAT TTTTCTGATT TTATAATTCA AAAGGAGCTC
ATATTAAAAG GGGAAATGAA AAGATACGAT AAGGAACAGG AGAAAATAAA GAAAACAGAA
GAATACATAG CCAGATATAA AGCCGGTATA AAGTCCAAGC AGGCAAGAGG AAGGCAGAAA
ATACTGGACA GACTTGAAAG AATGGATGAT CCTGTTTTTA ATCCCGGGAG AATGAAGCTG
AAATTTGAAA TATTGTCAGC TACAGGGGAT AATGTATTAA AAGTAAAAAA TATAGAGAAA
AGCTATAACG GAAAGAAAGT TTTGAATAAT ATAAGCTTTG ACCTTTACAA AGGCGACAGG
GTAGGGATAA TAGGAAAAAA CGGAATAGGA AAATCCACTC TTCTGAAAAT AATAACAGGA
AACGAGAAGC AGGATAACGG AACGGTAGAA TTTGGAAGCA GGGTAAAAAC AGGTTATTAT
GATCAAAATC ATCAAAATCT GGATTACAGA AATGATATAA TTACAGAGCT TAATACAAGG
CTTGATCTTA CAGAGGAGTA TCTGAGAAAC ATGGCAGGAG GTTTTTTATT CACAGGTGAG
GAGACTTCCA AGAAAATAGA AAATCTGAGC GGGGGCGAAA AAGTAAGAGT GTCTTTTATG
AAGCTTATTA TGGAAAAGCC CAATTTTCTC ATATTAGATG AGCCTACGAA CCATCTGGAT
ATTTATTCTA TAGAGGTACT GGAGGATTCA TTGGAGGATT ACGAGGGGAC AATGCTTATA
GTTTCCCATG ACAGACACTT CCTGGACAGT ATATGTAATA AAATATACTA TCTTGATGAA
AATGGTCTTG AGGTATTTGA CGGTAATTAT GAAGATTACA AGGAAGGTAT TGCGGGGAAA
GCCGTAAAAG ACAGTGCGGA TAAGCAGGAG AAAAAGTTAA CCTATGAAGA GCAGAAGGAA
AGAGGACGGC AGGTTTCAAG ACTTAAAAAT GCCCTGACGA AGCTGGAAAA AGAGATAGAG
GAAATAGAGC TGGAAAAAGA AAACCTTGCA GATGAATATG ATAAAGCAGG CAGAAAAAAT
GATATTGGAC TTTTGATGGA GATACAGGAA AAAATAGGTA TTCTGGAACA GCAGGAAACT
GATAAAATGG ATGAATGGGA AAAAATAAAT CTTGAGCTGG AAGAAATCGA AGGGGAGCAG
CTTTAG
|
|---|
| Protein sequence | MAIIQLKNVY KQFSGEYILN KISFSIENRD KIGLVGLNGA GKSTLIRILL GLETHDQNEY
NEFGEITKSP DLRIGYLSQE YNFSDEKNTV YEEMLSVFHD EMELWRKIQK TNMKLSVAEP
AELEGLLEEL ERLNSEYEAK DAYTLEYKIK QILTGLELGT EYYDRMLEKL SGGERARVSL
AKLLLQEPEL LILDEPTNHL DLYSIEWLED FLKKYNKAFL LVSHDRYFLD NVCNKMFELE
NKKLYKYDGN FSDFIIQKEL ILKGEMKRYD KEQEKIKKTE EYIARYKAGI KSKQARGRQK
ILDRLERMDD PVFNPGRMKL KFEILSATGD NVLKVKNIEK SYNGKKVLNN ISFDLYKGDR
VGIIGKNGIG KSTLLKIITG NEKQDNGTVE FGSRVKTGYY DQNHQNLDYR NDIITELNTR
LDLTEEYLRN MAGGFLFTGE ETSKKIENLS GGEKVRVSFM KLIMEKPNFL ILDEPTNHLD
IYSIEVLEDS LEDYEGTMLI VSHDRHFLDS ICNKIYYLDE NGLEVFDGNY EDYKEGIAGK
AVKDSADKQE KKLTYEEQKE RGRQVSRLKN ALTKLEKEIE EIELEKENLA DEYDKAGRKN
DIGLLMEIQE KIGILEQQET DKMDEWEKIN LELEEIEGEQ L
|
|---|
| |