Gene Sterm_4003 details

Gene Information

• Locus tag: Sterm_4003
• ID: 8599447
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 4236403
• End bp: 4237098
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 35%
• Product: aspartate racemase
• Protein accession: YP_003310766
• Protein GI: 269122589

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.00000429712
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACTG TAGGATTAAT AGGCGGAATG AGTTGGGAAT CAACTTCGGA ATATTATAAA 
AAAATAAATG AAGGAATAAA AGAACAGCTC GGCGGATTTC ATTCCGGTAA AATACTGATG 
TACTCTTTTG ATTTTGATGA GATTGAAGCT CTTCAGCATA AAAATCAATG GGATGAGCTT 
ACTGAAATGC TTGTAGATGC AGGAACAAGA TTAAAAAAAG CCGGAGCAGA TTTTTTGGCA 
ATATGCACAA ATACAATGCA TAAGGTAGCT GATGAAGTAG CAGAAAAAAC CGGACTGAAA 
GTTCTTCATA TAGCAGATGT CACTGCAGAA GCTATAATAC AAAAAAATAA AAATATAGTA 
GGGCTGCTAG GAACGGATTT TACTATGTCT GAGGATTTTT ACAAAAAACG TCTGAATGAT 
AAGTATAATA TAGAAGTAAT GATTCCTGAA AAAATGGAAA GAGAAAGAGT GCACAGGGTT 
ATTTATGACG AGCTTTGCTG CGGGATAGTA AAAAGCCAGT CAAAAGCTGA ATTTATAACT 
ATAATAAATA ATCTGAAGGA TAAGGGTGCG GAAGGAGTCA TTCTTGGCTG TACAGAAATA 
CCAATGCTTA TAGAGCAGAA GGATCTGGAT ATAAGAGTAT TTGATTCTAT GAAGCTGCAT 
GCCGATGCAA TAGTAAAAGA GATGTTAAAC GGATAG 

 

Protein sequence

MKTVGLIGGM SWESTSEYYK KINEGIKEQL GGFHSGKILM YSFDFDEIEA LQHKNQWDEL 
TEMLVDAGTR LKKAGADFLA ICTNTMHKVA DEVAEKTGLK VLHIADVTAE AIIQKNKNIV 
GLLGTDFTMS EDFYKKRLND KYNIEVMIPE KMERERVHRV IYDELCCGIV KSQSKAEFIT 
IINNLKDKGA EGVILGCTEI PMLIEQKDLD IRVFDSMKLH ADAIVKEMLN G