| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3994 |
|---|
| Symbol | |
|---|
| ID | 8599438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 4226514 |
|---|
| End bp | 4227152 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | ribosomal protein L4/L1e |
|---|
| Protein accession | YP_003310757 |
|---|
| Protein GI | 269122580 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTTT TAGATATATA TACTATTGAC GGTACAAAAG CAGGAACTGT CGATGTAAAG
GAAGAAATAT TTGGTATAAA GCCTAACAAA GCAGTAATGC ACGAAGTATT AACTGCAGAA
CTAGCAGAAG TAAGACAAGG GTCAGCTTCT ACAAAAACTA GAGCTGAAGT AAGAGGTGGA
GGAAGAAAGC CTTTCAGACA AAAAGGTACT GGAAGAGCAA GACAAGGTTC GACAAGAGCT
CCTCACATGG TTGGCGGCGG TGTTTCACAC GGACCGAAAC CAAGAGACTA TGTAAAAAAA
GTAAATAAAA AAGTAAGAAA ATTAGCTATA AGATCAGCTT TATCAGCTAA GGTTAATAAG
GGAGAAATCA TTATAATAGA TGCTTTTGAA CTGGAAAAAC CAAAAACAAA AACAATTATT
GATTTTTCTA AAAAATTAGA TATGGCAGGG GCAAAACAGC TTTACATACT AAATGACTTA
TATATAGAGA ATGAATATAA CGCATATCTG TCTATAAGAA ATATAGAAAA ATCATATGTA
CTAATGCCAA ATGAGTTAAG TGTTTACTGG TTATTGAAAC AGGACAAAAT AATCATGACA
AGAGAAGCAC TTGCACAGAT CGAGGAGGTG CTAGCATAA
|
|---|
| Protein sequence | MPVLDIYTID GTKAGTVDVK EEIFGIKPNK AVMHEVLTAE LAEVRQGSAS TKTRAEVRGG
GRKPFRQKGT GRARQGSTRA PHMVGGGVSH GPKPRDYVKK VNKKVRKLAI RSALSAKVNK
GEIIIIDAFE LEKPKTKTII DFSKKLDMAG AKQLYILNDL YIENEYNAYL SIRNIEKSYV
LMPNELSVYW LLKQDKIIMT REALAQIEEV LA
|
|---|
| |