Gene Sterm_3854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3854 
Symbol 
ID8599300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp4095284 
End bp4096324 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content41% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003310619 
Protein GI269122442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.403514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGACA AAATACTGGA AGTAAAAAAT TTACATGTTT CATTTGATAC TTATGCCGGA 
GAAGTAAAGG CAATAAGAGA TTTAAGCTTT GAAGTAAGAA GAGGGGAAAC ACTGGCAATA
GTCGGAGAAT CAGGATCAGG AAAATCTGTT ACCGTACAGA CTATAATGAA ATTAATACCC
ATGCCTCCGG GAAGAATCAA GAGCGGGGAA ATATGGTTTG AAGGACAGGA TCTGGTGAAG
GTTTCTGATA AGGTCATGAG ACAGCTCAGA GGCGGAAAGA TAGGAATGAT ATTTCAGGAT
CCGATGACTT CGCTGAACCC TACAATAAAA ATCGGAAAAC AAATAATGGA AGTTATAAAA
TTACATAAAA AAGTTTCAAA TGCCGAAGCA AAAAAGCTGG CAATTGAAAT GCTGGATAAA
GTGGGAATTC CAAAGCCAAA AGACAGATTT AAGCAGTATC CGCATGAATT TTCAGGCGGA
ATGAGACAAA GAGTGGTAAT AGCAATAGCG CTTGCAGCAG AGCCGGATCT TCTAATCTGC
GACGAGCCTA CGACAGCACT GGATGTTACG ATTCAGGCTC AGATACTGGA ACTTATCAAC
CAGCTGAAAA ATGAAATGAA TATAGGAGTA ATTTTGATTA CGCATGACTT GGGAGTCGTA
GCAGAAACAG CCGACAGAGT TATAGTTATG TATGCAGGAG AAAAGCTCGA GGAAGCCAAT
GTAGTTGATC TTTTCTATGA TCCGAAGCAT CCGTATACAT GGGGACTTTT GGAGTCACTG
CCAAGACTGG ATATGGACAG CAATGAAAGA CTGAAAGCAA TACCGGGAAC TCCTCCGGAT
CTGCTGAATC CTCCTAAGGG AGACCCCTTT GCAGCGAGAT CTGATTATGC AATGGTAATA
GATTATGAAG AAGAACCGCC TTTGGTGGAT CTCGGGAATA ATCACTTTGT GAAATCATGG
CTCTATGTGG AAGGAGCCCC AAAAATAGAT CCTCCTTTCA GATTAAAGAG GAAAGATAAG
ACAGACGGGG AGGATTTATA A
 
Protein sequence
MDDKILEVKN LHVSFDTYAG EVKAIRDLSF EVRRGETLAI VGESGSGKSV TVQTIMKLIP 
MPPGRIKSGE IWFEGQDLVK VSDKVMRQLR GGKIGMIFQD PMTSLNPTIK IGKQIMEVIK
LHKKVSNAEA KKLAIEMLDK VGIPKPKDRF KQYPHEFSGG MRQRVVIAIA LAAEPDLLIC
DEPTTALDVT IQAQILELIN QLKNEMNIGV ILITHDLGVV AETADRVIVM YAGEKLEEAN
VVDLFYDPKH PYTWGLLESL PRLDMDSNER LKAIPGTPPD LLNPPKGDPF AARSDYAMVI
DYEEEPPLVD LGNNHFVKSW LYVEGAPKID PPFRLKRKDK TDGEDL