Gene Sterm_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3544 
Symbol 
ID8598990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3757301 
End bp3758182 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content38% 
IMG OID 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003310309 
Protein GI269122132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.340303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT ATTCAGCTGA TTTAGGGCTG TTATTGGTAG GTTTTATTTG GGGAACAGGG 
TTTACAGCGA CTAAAATAGG TTTGGACGGC GGAATTACAC CGTATTATAT GATGTTTCTG
CGGGCGGCTT TTGCATCAAT ATTTATAAGC GTGATCTTTT TCAGAGAGCT GCGCAATGTA
ACAAGAAGAG AGGTTTTGGC TGGAGTTCTG CTGGGAGTTT TTTTATATCT CGGCTTTTCG
TTTCAGACTG TGGGTCTGGT GTATACGACA GCATCTAAAA ATGCTTTTCT TACAGCGATA
AATGTAGTTT TAGTGCCGTA TTTATACTGG ATGTTTTATA AAAAAAGACC TGATATATTC
GCTGTTTTAT CAGCTGTACT GTGTTTATGC GGGATCGGCC TGCTCAGTCT GACAGGAACA
GATTTTTCTC TCAATAAAGG GGATATACTT ACAATGATTT GTGCTGTGTT TTTTGCCTGT
CATATAACAT TTACCGGGAT ACTGTCAAAA AAAGTAGATG CAATAAGGCT GAATCTGGTT
CAGATGTATA CTATGACTGT GTTTTCATTT ATTACATGTG TATTCAACGG AAGTATAACA
TTAAATGTAA CACAGACACA GTTTTTGGCA GTATTATATC TTGGGATTTT TTCCACGGGA
ATATGCTTTC TGCTTCAGAC TACCTGTCAG CAGTACACAA CACCTGCAAG AGCTTCGATA
TTATTATGTA CTGAATCATT ATTTGCACCT GTTTTGTCAT TTCTGATACT GCATGAAGTA
TTAACGCCAA AGGCAATAGC GGGAGCAGCA CTTATTCTGA TTTCTGTTAT AGTTTCAGAA
ACTAAGCTCG GATTTGGAGC AAAGAAGGAG CAGAGCACTT AA
 
Protein sequence
MKKYSADLGL LLVGFIWGTG FTATKIGLDG GITPYYMMFL RAAFASIFIS VIFFRELRNV 
TRREVLAGVL LGVFLYLGFS FQTVGLVYTT ASKNAFLTAI NVVLVPYLYW MFYKKRPDIF
AVLSAVLCLC GIGLLSLTGT DFSLNKGDIL TMICAVFFAC HITFTGILSK KVDAIRLNLV
QMYTMTVFSF ITCVFNGSIT LNVTQTQFLA VLYLGIFSTG ICFLLQTTCQ QYTTPARASI
LLCTESLFAP VLSFLILHEV LTPKAIAGAA LILISVIVSE TKLGFGAKKE QST