Gene Sterm_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3500 
Symbol 
ID8598949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3704835 
End bp3706196 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content27% 
IMG OID 
ProductDNA photolyase FAD-binding protein 
Protein accessionYP_003310268 
Protein GI269122091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAA ATAGAATAAA AAGTATTAAT AATAAAAAGA TGGATAAAAA CGGTGATTTT 
ATTATTTACT GGATGCAGAG AAGCATAAGA AGTTCCTATA ATCATTCATT AGAATATGCA
ATTCATTTAG CAAATGATTT AAAAAAAAAT TTATTGGTAA TTTTTTGTTT TGACAGAAAA
TTTTCAGAAA TGAATGAACG AAGCTGTTAT TTTCTTTTTG AATCGCTTAA AGATGCGGAG
AAAAACTTAA AAGACAGAGG GATTAGATTC ATAGTTTTAG ATTCAAGTCC TTTGATAACT
AAGATTTTGG AGTATTCAAA AAGATCTGTC TGTATTATAA CCGATAGGGC ATATTTAAAA
TATTTGAGAA AAATAAGAGA AGAAGTCGGG GAAAAAGTTT CTGTAAGAAT GATTCAAATA
GAATCAGATG TAGTAGTGCC GATAGAAATA GCATCTTTAA AAGAAGAATA TTCAGCAAGG
ACTCTCAGAG GAAAATTACA TAAGGTTTTA GATTTTTATT TAAATAAAGA TTTTGAATAT
ACTAAATATG AAATGAATTA TCTAGATGAA ATTAAAACTG ATTTTGATTT AGAAAAAATA
CATGAAATAA TTGAAAGCCT GAATATAGAT AAAACAGTAA GAAAATCAAA TTACTTTACC
GGAGGAGAAA ATACGGCAAA AAAAATTCTG GAAAATTTTA TTTCTGAAAA ATTAGAAGGA
TACAGTAAAT TTAGAAATAA TCCTGAATTA GAATATCAGT CAAATTTGTC TCCTTATTTG
CATTTTGGAA ATATATCTCC TTTATTTGTG GCAAAAGAAA TTTCAAAATC TGAAAAAAAC
AGAGAATCTT TGGAGGAATT TTTGGAAGAA CTTATAGTAA GGAGAGAATT GGCAATAAAT
TTTATTTATT ATAATCAAGA TTACGATAAA TTTCAAAATA TGACATATTT ATGGGCATAT
GAAACTATGA ATAAACACAA AAATGATCAA AAAGAGTATG TGTATTCATT AGAAATTCTT
GAAAAAAGTG AAACACATGA TGAATACTGG AATTCGGCTC AGAAAGAAAT GATGGTAACA
GGTAAGATGC ATGGCTATAT GAGAATGTAC TGGGCAAAAA AAATAATAGA ATGGACTGAA
AAATTTGAAG AAGCTTATGA AATAATAAAA TATCTGAATA ATAAGTATTT TATTGACGGC
AGAGATGAAA ACGGTTATGC AGGAATAGCA TGGTGTTTTG GAAAACATGA CAGAGCTTGG
AATGAAAGAA ATATTTTCGG AAAATTAAGA TATATGAACT CAAATGGTTT GAAAAGGAAA
TTTGATATAG AGAAATATGT GGAGAAGATA AATAAACTAT AG
 
Protein sequence
MFENRIKSIN NKKMDKNGDF IIYWMQRSIR SSYNHSLEYA IHLANDLKKN LLVIFCFDRK 
FSEMNERSCY FLFESLKDAE KNLKDRGIRF IVLDSSPLIT KILEYSKRSV CIITDRAYLK
YLRKIREEVG EKVSVRMIQI ESDVVVPIEI ASLKEEYSAR TLRGKLHKVL DFYLNKDFEY
TKYEMNYLDE IKTDFDLEKI HEIIESLNID KTVRKSNYFT GGENTAKKIL ENFISEKLEG
YSKFRNNPEL EYQSNLSPYL HFGNISPLFV AKEISKSEKN RESLEEFLEE LIVRRELAIN
FIYYNQDYDK FQNMTYLWAY ETMNKHKNDQ KEYVYSLEIL EKSETHDEYW NSAQKEMMVT
GKMHGYMRMY WAKKIIEWTE KFEEAYEIIK YLNNKYFIDG RDENGYAGIA WCFGKHDRAW
NERNIFGKLR YMNSNGLKRK FDIEKYVEKI NKL