Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3436 |
Symbol | |
ID | 8598887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 3628396 |
End bp | 3634740 |
Gene Length | 6345 bp |
Protein Length | 2114 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | YP_003310206 |
Protein GI | 269122029 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.292491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAACA AGAATAAATT GTTATTATTT TTAGCATTGA ATGCAGCGTC GTCTTTTGTA AGTGCAAAAG AAATAGGCTA TGATAAAATG TATGATAAAA TAACAAAAAA TATTACAACT GGAAAATCAA ATAATGATTC ATATAAACTA ATAGAGCGAA TACTCGTTCA GAGAAACAGA GAATTAAAAG ACTTATATGC ACAGGGAGAC TACATAGTAA AGCCCGAATA TTTAGAATGG CAGATTTTTG CAACAGGCTT TTATGCTGAA AGAGGGAATG GAGATAATAC AAGCGGGAAT GCAAGATATA ATTCAAAGAC TGAAGGATAC TTTGATGAAA ACGGAAAATA TGTGTCATCA TCTTCAGGGA AGCCGTATAA AGATAAACAG GAACCTAAAA CAATAGAATT AGGGATAAGT ATACCGTTAA AAGGAATAAA CAGAGAGGGA CTGCAGGTAA ATATAAATCC AAATGTAACT AAGCCGTTAA TTTCAGCTAT ACAGGGAATG AATCCGGTAA ATTCATTAGA TGTTCCTGTA TTGGAATTAT TCGAGTTTAA TCCGCTAAAG CCTGAAATAA TTCCGCTGAC TCCGGCTGCA GTATCTATAA CACCTCCTAA TCTGGCTGTA TATAATCACG GACAACCGGA TCTGGTATAT GGAAGAGATA CTAATCTGCC TGCCGGTACA TATAAAACAA GCGATCCTCT TAACCTAATC AGCGGGGATG GAGTAGTAGA TGCTATTATA GATTATAGCG GTGCCAGCGG AGTCAGAACT TCAGACGCAG CTTCAACAAT GATAGTTGAT ATAGCCGGAA AAAAAGCAGT TTCAATAGAT GGAAGTACAG TAGATTTTTA TGGTAACGGT ACAATGGAAT TAAATGCAAT AAATACTGCC GGAATAGCTA TGGAGAGTAA TCCGAGCAGC AGCCCGAAGG CTACAAATGT CGGAACAATT AATGGAAATA ATAATAGTCA GGCAGCATTA ATTTTTATAA ATGAACAATC TTATAGTGCT GATTCATATG CTTTGACAAA TAATGGAACT GTAATCATGA ATGGGAATAG TTCACTGGGA ATGGCAATAA ACAGTGCAGC AGGAGGCCAT TTAGTAACTG CTGTAAATAA TAAAAATATT ACAATGAACG GAAGCGGAAG TTATGGTTTG GTTATAATGG CCGGATCAAA TCTAAGAGCT GGTTCGTTAA TCGAAAATTC TTCAACAGGT AATATAACTA TAAAAGAAGA AAATTCCGGC GGTTTAGTTG TTTTATCAGG AGGGGTAAAT GCTAAAAATG ACGGAGTGAT TGATTTAACT TCAACTGCTA AAAATTCGTT TGGTATTTAT GCTACTTCGG CTAATACAAA TGCGATAGCA AATAATGGAA ACATTAATAT TGCAGGAGAA AATTCCATAG GTTTGAGATC AGAAGGCGGA ACTTTAGTTA GTGGTACAAA TGGTGTAGTA GATATTACAG GCGGTTCAGG AAATATCGGG ATGTATGCTT CCAGTGGGAG TGTTACAAAT AACGGAGAAA TAAAAATAAC AGGCGGAACT CAGAATAAAG CTTTCTTTAT TACAGGTGCA GGAAGTACAG GGACAAGTAC TAATAAGGTG GATATTAATG CAGATGAGTC ATATGGTGTA ATAGTAACAA ACGGAGGACA ATACACAGGG AGCGGGACAT TCTCGATTTC AGGAGATAAC TCATATGGAT TTGTAGCCAA AGGCGGTACT ATAAATGGTG GAAGTTCGCT TACCGCTGAT CTTACAGGAG AAAAATCGGT GGCTGTTTAT GCAGGAGACA GTACTACTGC AAGTTTAGTT ACACTAACAG GCGGAACAAT TAATGTCAAG GACGGCGGAG TTAACTTTGG AGCCGGACAG AACGGTACTC TTAATTTAAA TAATATGAAT TTTACTGTTG GAAGTCAGAG TTTAGGATTT TTTACACAGG ACAACGGAAA TATAATTATT CAAAATTCAA CAGGAACAAT TAAAGGCGGA ACTACATCAG CAGACAGAGG AACTGCATTT TCAGTAAAAG GAAGCGGTAT AGGAGTAACA GAAGTAAATT CAATAGCTGA TTTGAGTACA TTGTTAACGG CCTCGGGGAT AAATCCTACC AATTTGACGT TAACTATGGA GTCAGATTCA AGATTATTGT CACTCTCTGA AGCTTCAGTA AAATTAAGTG TAATAAGCAG TATAAATTCG TCTCCTATTT CATTGCCAGG AGTAACAATA AACGGGAATG ACTATAAGAC AATGCTGGTA TATAAGGGTC TTTTGAATAT AGATGAAGAA GTCAATTTAG ATGATCCTAT GTCTGATTAT TCCAGAGTTG AGATGGCAAA CAGTACCATA TTAAACAACA ATGTAATAAA AGGAGCGGGC AATTCACAGC AGGGAATGGC ACAGGCAAAT GGTGTCGGTC TGCCAAAATC AGTTGTAACA TTGACAAATA ACGGAACAAT TAATCTTGGA GGACAGGAAT CTGTGGGAAT TTATGCAGAT TACGGAATCA TAAATAATAA TAATACAATA GATACACAAG GAAATAAATC TTTTGGAATA TTCGGAGTAA ACGGAACAGA AATAACAACT GCTGCAGGAA GTACAATAAA AGCAGGAAAC AACGGAGCCG GAATAGTAGC ACAGAGCTAT ATTATAGATA AGCTGACAGG TTTAATAGTA AGTAACGGTT ACGGAGACGG AACATTTGAG GTAGATCACA GCGGTGTAAT TACTATGTTA GGGACTGACT CATTCGGAAT TTTTGCAGAT AATAATGATA CAAATTCTTT GACTAATATA GCAGCTAGAA AAGTAACATT AAATGCCGGT TCGATGATAG ATATGAGCGG AACAGCATCA AAAGGAACAG CACTATATAT AAATAAAGGA ACTTTGACTA CTTCCGGAGA CATGAAAGTA GGAAATGAAG GTGTGGGAAT CTATGCCAAT GACAGTAATG TATCTCTAAA CGGAGGAACA ATAGATATTA TCGGCTCAGA TTCTACGGGA ATATATCTGG ACGGAACTAC AACATTAACT GCAACAGGCG GTACAATAAA TGTAAAAGGC GATAATGCAA CAGTGTTTTT CGTAAATTCA CTGGCAACAG CAGCAGGACT GGATAATGTA ACGGTAAATG CGGATCCGGG TCTGAAAATA ACACTGGCTA ATGTAAAAAA TAATAATTTT ACATATAACG GAGCATTAAA TAATGCAGGA AAAGATTCAG TATTAATAGC AGGAGATAAT TCAACGATAG TATTTGGTAC AGGAGCTGTA ATAAATTCTA CATCAGAGAA TGTCGCAGGA ATGTCAGCCA AAGGCGGAAG TGCTGTAAAT AAAGGCACAC TGACTTTAAC AGGAACGAAT TCAATAGGAA TCTATGCTGA AAATGCCGGC TCATCAAATG AAGGAAATAT AATTCTGGGA TCAAGCGGAG TAGGTATATA TAATGAGAAC GGAACAGCAA GTAATATATC CGGTAAAATA GAAATGGGTA ATAACGGGGT AGGAATATTT GGTTCTGACT CTGCAGCTAT AAATAATGAT GCATTGATAA GCAGTATCGG AAATTCGGCA ATAGGTATCT ATGCAGATGG AAATACAGCA GGAACAACAA TAACAAATGA TTATTTAGGG AAGATAGATA TATCAGGAGA AAATGCAATA GGAATTTATA CTGCAGGGAC AACAGCAAAA ACTGTGATAA ATAACGGAGA AATAAAAGTA GGAAATTCAT CTGATGCAAG TAATCCAAGT ATAGGAATAT ATAATAATAT TTTAGGAAGT ACAATCCAAA ATAATGGTGT TCTGACTTTA GGAACGAATT CCCTCGGAAT ATTTGATAAA GGCGGATCAG TAACAGAAAA TGGTACATTA AATGTAGGAA GCATGGGTAC CGGAATACTC TCAGAAAACG GAACTGTTAA TATAACAACA TCTTCGGTAA TGAATATAAC CGGAACAGAT GCAATAGGAG TTTATGGGAA AAATAATGCA GCTGTAACAA ATGCTTCATC TGGAATAACA TTAGGCGATG GAAGTTACGG ATTTGTACTG GAAACAGGAT CTGGTCTCAC AAATACAGGA TCAATAACAT TGGGAGACAG CAGTATCTTT GTTTACGGAA ACGGAGCAGG AATAATAACA AGCTCAAATA CAGCATCAAT AACAGCTTCA GGATCTGAAA ATGTAGTATT TTATACTGTA AACGGCGGAA CAATAAAGAA TGATTCATCA ATAACAGCTG ATACAGGAAT AGGAAATATA GGTATTTATA ATAACGGAGG AAGCATAGAA AACAATGGTA ATATTTCATT GGGAGATTCA CTGCTGTTTA AAAATAACGG AGTAATAGAC CCTGATCAGA GTAAATATTC CGTGGGAATA TATGCTGAAG GCTCGACGGT ATTAAATACA GGGAATATAT CTTTAGGAGC AGATGCAGTA GGAATATATG TGAAAGATAA TACAGTCATG GCTGTGAATC ATGGGAATAT AACTGCCGGA ACTTCATCAG CACCAAAGGC CGGAGCAATA GGAATATTCG CAGAGGGCGG AGCAGGAATA GAAAACTTCG GGAATATAAC ATTATATGGT GATAATTCTA TAGGTATTGC CGGAAAAAAT GCCGCAAATA TCATAAATCA CGGAATAATA ACTGTATCAG GAAATGAAGC AGTGGGAATT TACGGAACTT TGAATACATC AGTAGAGAAT AAAGGAACAA TAAATATATC AGGTACTGAC AGTGTTGGAA TAATGGCTCC AAACGGGAAG ATAATAAATG AAGGAACTAT TAATTATACT AACGGAGCCT TTGCAGTAAA AGAGCAGGAC AGCTATCCTC TCCCAGAGCT TGTAAATATG GGGTTAATTA CAGTTGACGG TCATTTTAGC AATGAGGGAA TGGAGATATC ATTAAAGCCG GATTTGAATA CACTTGCTCC ATCGACACAG CCTGATGTAG ATTTTGTACT AAACAGCGGA ACAATATCTG CAAATAGTAT GACAATAACA GATACGGTAA AAATACTTCC TGATTTTTCA CAGGGAACAA ATGCTAATGT TTATAAACTG GAAAATGTAT TCATGACAAG CACGGGACAG ATCATTTCTT CTAACGGGAA GATACCGATG GTAAGTAAAT CACTGACATG GGAAGCAACG CCGAAAGTAA ATGATGACGG AAATGTGGAT ATTTATATGC ATAAATTAGC TTATAAGGAT TTTTCGGACG GACTGTGGTA TGAGGAGTTT GCACAGGCAC TGGATGAAAA ATATGCAGGT TCAGCGGGAG AAGCCGGAAG TATATTTGAT AAAATTGACT TGATAGAGGA AGAAAGCGAT TTTAGACATG TAATGGCAAG TCTTGCAGGG AATGTTTATG CTAATATGAA TCAGAGAACA GATGATATAG CAAGAGCTTT TGACAGTTCA TTAATGTTAA TGGAAAATTC AAAAAACAAT ACAAAAGAAA ATGTGAAAAT AAATGTAATA GCGGGCAGAG GAAGAACAAA AGAAGATACA GACGGAGTAG TCGGCTATGA TTATACAACA ACAGGAGTTC TGGCATTAAG AGAAGTAGAA AGAACTTACA GACATACATT CGGATATTCA CTTGGATATC TGCATACAGG TTTTGAATTT AAAGACGGAA ATGAAAGTGA AGAATGGGTA AATACAGTTC AGCTGGGATT ACACAATAAA TATGATGCCA ATGACTGGAT TTTGAAAAAT AACTTAATCG GAAGAGTGAG CATACATAAT ATAGACAGAA ACATAGACTG GCCTTCGCCT ACAGGAAGAT CAGAAATGAA CGGAACATAT GAAACATATT CATTATCTTC TGATAATACA TTCGGAAAAG AGCTGGCTTT AGGAAAAAAT ACAAGTCTGA CACCATATGG AGGAATAAAA GCAACATATA TTACAAGACC AACATTTAGT GAAAGCGGTC TGGAATCATT ACAGGTAGAA GGAAATGATG CATGGAGTGT AAAACCCAGA GCAGGTATTG AGCTGAAAGG ATCACTGCCT TTAGGTTCTG CAGGCGGATG GCAGGTGAAA GGAGCTTTGG ATCTGGCATA TGAGTATGAA CTGGCAGATC TGAACGAAAG AGAAAGTGCA AGATTAACAA AGATAGAAAG TAATTATCAT GATTTATCAA AGCCTGAGGA TGAAAAAGGT ATGTTCAGAA CAAGAGCAGT ATTTGGAATA GAAGCAGAGG ACAGATACGG TATATTTATG ACAGGGGAAT ATGGTATAGG AAATAGTGAA AAAGATGAAT ACAGAGTAGG AGTAACATTA AAAGCAGTAT TTTAA
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Protein sequence | MKNKNKLLLF LALNAASSFV SAKEIGYDKM YDKITKNITT GKSNNDSYKL IERILVQRNR ELKDLYAQGD YIVKPEYLEW QIFATGFYAE RGNGDNTSGN ARYNSKTEGY FDENGKYVSS SSGKPYKDKQ EPKTIELGIS IPLKGINREG LQVNINPNVT KPLISAIQGM NPVNSLDVPV LELFEFNPLK PEIIPLTPAA VSITPPNLAV YNHGQPDLVY GRDTNLPAGT YKTSDPLNLI SGDGVVDAII DYSGASGVRT SDAASTMIVD IAGKKAVSID GSTVDFYGNG TMELNAINTA GIAMESNPSS SPKATNVGTI NGNNNSQAAL IFINEQSYSA DSYALTNNGT VIMNGNSSLG MAINSAAGGH LVTAVNNKNI TMNGSGSYGL VIMAGSNLRA GSLIENSSTG NITIKEENSG GLVVLSGGVN AKNDGVIDLT STAKNSFGIY ATSANTNAIA NNGNINIAGE NSIGLRSEGG TLVSGTNGVV DITGGSGNIG MYASSGSVTN NGEIKITGGT QNKAFFITGA GSTGTSTNKV DINADESYGV IVTNGGQYTG SGTFSISGDN SYGFVAKGGT INGGSSLTAD LTGEKSVAVY AGDSTTASLV TLTGGTINVK DGGVNFGAGQ NGTLNLNNMN FTVGSQSLGF FTQDNGNIII QNSTGTIKGG TTSADRGTAF SVKGSGIGVT EVNSIADLST LLTASGINPT NLTLTMESDS RLLSLSEASV KLSVISSINS SPISLPGVTI NGNDYKTMLV YKGLLNIDEE VNLDDPMSDY SRVEMANSTI LNNNVIKGAG NSQQGMAQAN GVGLPKSVVT LTNNGTINLG GQESVGIYAD YGIINNNNTI DTQGNKSFGI FGVNGTEITT AAGSTIKAGN NGAGIVAQSY IIDKLTGLIV SNGYGDGTFE VDHSGVITML GTDSFGIFAD NNDTNSLTNI AARKVTLNAG SMIDMSGTAS KGTALYINKG TLTTSGDMKV GNEGVGIYAN DSNVSLNGGT IDIIGSDSTG IYLDGTTTLT ATGGTINVKG DNATVFFVNS LATAAGLDNV TVNADPGLKI TLANVKNNNF TYNGALNNAG KDSVLIAGDN STIVFGTGAV INSTSENVAG MSAKGGSAVN KGTLTLTGTN SIGIYAENAG SSNEGNIILG SSGVGIYNEN GTASNISGKI EMGNNGVGIF GSDSAAINND ALISSIGNSA IGIYADGNTA GTTITNDYLG KIDISGENAI GIYTAGTTAK TVINNGEIKV GNSSDASNPS IGIYNNILGS TIQNNGVLTL GTNSLGIFDK GGSVTENGTL NVGSMGTGIL SENGTVNITT SSVMNITGTD AIGVYGKNNA AVTNASSGIT LGDGSYGFVL ETGSGLTNTG SITLGDSSIF VYGNGAGIIT SSNTASITAS GSENVVFYTV NGGTIKNDSS ITADTGIGNI GIYNNGGSIE NNGNISLGDS LLFKNNGVID PDQSKYSVGI YAEGSTVLNT GNISLGADAV GIYVKDNTVM AVNHGNITAG TSSAPKAGAI GIFAEGGAGI ENFGNITLYG DNSIGIAGKN AANIINHGII TVSGNEAVGI YGTLNTSVEN KGTINISGTD SVGIMAPNGK IINEGTINYT NGAFAVKEQD SYPLPELVNM GLITVDGHFS NEGMEISLKP DLNTLAPSTQ PDVDFVLNSG TISANSMTIT DTVKILPDFS QGTNANVYKL ENVFMTSTGQ IISSNGKIPM VSKSLTWEAT PKVNDDGNVD IYMHKLAYKD FSDGLWYEEF AQALDEKYAG SAGEAGSIFD KIDLIEEESD FRHVMASLAG NVYANMNQRT DDIARAFDSS LMLMENSKNN TKENVKINVI AGRGRTKEDT DGVVGYDYTT TGVLALREVE RTYRHTFGYS LGYLHTGFEF KDGNESEEWV NTVQLGLHNK YDANDWILKN NLIGRVSIHN IDRNIDWPSP TGRSEMNGTY ETYSLSSDNT FGKELALGKN TSLTPYGGIK ATYITRPTFS ESGLESLQVE GNDAWSVKPR AGIELKGSLP LGSAGGWQVK GALDLAYEYE LADLNERESA RLTKIESNYH DLSKPEDEKG MFRTRAVFGI EAEDRYGIFM TGEYGIGNSE KDEYRVGVTL KAVF
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