Gene Sterm_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3418 
Symbol 
ID8598869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3609932 
End bp3610996 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content39% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003310188 
Protein GI269122011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TATTATTGTT AAGCCTGCTG GGATTGGTTT TTATAACAGC ATGCGGGAAA 
AAACAAGCAA TAGATCCAAA TACACCAGCA GATATAGAAC AGGCTAAAAA AGAGGGGAAA
TATGTAACTT ACGGACAGCC TGATGACTGG GCAAACTGGA AAGGGGTTTT TGAAAAGTTT
AATTCTATAT TTGGAAATAC CCGTGTGGAT ACTGATATGA GCAGTGCTGA GGAAATAACA
AAATTTAAGG CAGAAGCAAA CAATCCGCAG GCTGATTCTG CGGAAATAGG AATGGTATGG
GGGAAAATAG CAGTAACAGA GGGCGTAACG CTCCCGTATA AAAATGCTAA CTGGGATAAA
ATACCGGACT GGGCAAAGGA TAAGGACGGA AATTTTACCG GGCTTTATGT AGGAGTACCT
GTAATTTTGG TTAATAAAGA TCTTGTGAAA AATATTCCTA CATCTTGGGA GGATTTAAAA
AAGCCTGAAT ATAAAAACAG TATTGTCATA GCTGATCCCC GTTCATCAGG TTCAGGGGTA
AATATGGTTC TTGCAGTGGC TTACGCACTT GGAGGGGATG TAAAAAATCT TGATCCTGCA
TTTAAATATT TTGCAGAGCT TCAAAAACTG GGAAATATAA AGAATATAAA AGGGAGTACG
GCAAATATAC AAAAAGGCGA AGTACCCATA ACTATACAAT ATGACTTTCT TGCTCTTGGA
AATAAAAGAA AGCTGGCAAA TGAAGTAAAT CTGGAAATAG TATTTCCCAA GGAAGGTTCT
ATATATGCTC CCGGAGCTTT GATTCTGAAT AAATATGCAC CGCATCCGAA TCTTGCAAAA
GCATTTGCTG ATTTTGTTAC TTCTGATGAA GGACAGCTTG AATTCGCCAA AGGCGGGGCA
ATGCCTGTAA GAGCAGTAGC AGGGAATCTG ATTATTCCCG AGGAAATAAA AAAACAGATG
CTTCCTGACA GCTTTTATAA AAAAGTAGGC AAGCCGCAGA GCTGGAGTGA AATAACACCT
GATGTAATTG CAGACAGATG GGAAAAAGAG GTTGTTTCAC AATGA
 
Protein sequence
MKKLLLLSLL GLVFITACGK KQAIDPNTPA DIEQAKKEGK YVTYGQPDDW ANWKGVFEKF 
NSIFGNTRVD TDMSSAEEIT KFKAEANNPQ ADSAEIGMVW GKIAVTEGVT LPYKNANWDK
IPDWAKDKDG NFTGLYVGVP VILVNKDLVK NIPTSWEDLK KPEYKNSIVI ADPRSSGSGV
NMVLAVAYAL GGDVKNLDPA FKYFAELQKL GNIKNIKGST ANIQKGEVPI TIQYDFLALG
NKRKLANEVN LEIVFPKEGS IYAPGALILN KYAPHPNLAK AFADFVTSDE GQLEFAKGGA
MPVRAVAGNL IIPEEIKKQM LPDSFYKKVG KPQSWSEITP DVIADRWEKE VVSQ