| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_2738 |
|---|
| Symbol | |
|---|
| ID | 8598194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 2915797 |
|---|
| End bp | 2917017 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | protein-export membrane protein SecD |
|---|
| Protein accession | YP_003309514 |
|---|
| Protein GI | 269121337 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTA AGACAAGTAG GATAGTAATA CTTATACTGG TTGTGGTAAT ACCGGCAATA
CTGATTTTTA GAAATCCTAT TAATCTGGGA CTGGACTTAA GAGGCGGGAC ATCAGTAGTA
CTGGAAGCTC AAGAAGAAGA CGGTAAAAAG TTACAGCCTG ATACTATGGA TAAAGTAAGA
GAAATAGTGC AAAGAAGGGT CGACGGTCTG GGAGTGTCGG AACCGGTTAT CCAAAAAAGC
GGGGAGAACA GACTTATTGT AGAGCTGGCA GGGGTTAAAG ATGCTCAGGA AGCAATAGAT
CTGATAGGAA CTACTGCAAA ACTTGAATTT AAAATAAAAA CAGGGGATAA TTCATACGGA
CCAACAGTTT TAGACGGTTC GGCAATAAAA AATGCTTATG TACAACAGGA TCAGTTCGGT
AAGCCTATGA TAGGATTTGA ACTGAATGAT GAGGGAGCAG TTAAATTTGC TGAAATAACT
AGGACAAACA TGGGAAAACA GCTGGCAATA ATGCTTGACG GCAAAGAACA GTCAGCACCT
GTTATCCAGT CGGAAATTCC CGGCGGAAAA GGATCAATAA GCGGAAGCTT TACATATGAA
AGTGCACAGA ATCTGGCAAA TCTTCTAAAA GCCGGGGCAC TTCCGGTAAA TATCCAGATA
ATGGAAACTA GAAGTGTAGA TGCATCATTA GGGGCAGAGT CTATAAAAGC AACTAAAATG
GCTGCAATGA TTGCTCTGGT TCTGGTTTCG TTATTTATGC TTGCAGTATA CAGAGTAGCA
GGATTTGTTG CAGATTTAGC GTTATGTGTA TTTGGAATTT TGACAGCCGG TTTGATGTGT
GCTATAGGAA CAACGCTTAC ACTTCCGGGA ATAGCCGGAT TTATATTGTC TCTGGGAATG
GCAGTGGATG CGAATGTAAT TATCTTTGAA CGTATAAAAG ACGAGATAAT GGAAGGCAAA
AGATTTCAGG ACTGTATAGA TGACGGATTT AACAGAGCAT TTCCGGCAAT TTTGGACGGA
AATATAACAA CCCTGCTGAT AACAATGGTT TTATTCTTCT TTGGTACAGG ACCTGTAAGA
GGATTTGCGG TTATTCTTAC CATTGGGGTT CTCGTAAGTA TGTTTACGGC AATATTTATT
ACAAAAATTA TTGTAAAAAT ATTTGTTAAT ATATTCCATT TAAACGGGGA AAAATTATTT
GGTCTGAAAG GAGTGGAATA A
|
|---|
| Protein sequence | MEIKTSRIVI LILVVVIPAI LIFRNPINLG LDLRGGTSVV LEAQEEDGKK LQPDTMDKVR
EIVQRRVDGL GVSEPVIQKS GENRLIVELA GVKDAQEAID LIGTTAKLEF KIKTGDNSYG
PTVLDGSAIK NAYVQQDQFG KPMIGFELND EGAVKFAEIT RTNMGKQLAI MLDGKEQSAP
VIQSEIPGGK GSISGSFTYE SAQNLANLLK AGALPVNIQI METRSVDASL GAESIKATKM
AAMIALVLVS LFMLAVYRVA GFVADLALCV FGILTAGLMC AIGTTLTLPG IAGFILSLGM
AVDANVIIFE RIKDEIMEGK RFQDCIDDGF NRAFPAILDG NITTLLITMV LFFFGTGPVR
GFAVILTIGV LVSMFTAIFI TKIIVKIFVN IFHLNGEKLF GLKGVE
|
|---|
| |